Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 SPTLC1P2-201ENST00000407089 121 ntBASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 RN7SKP114-201ENST00000410327 279 ntBASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 RN7SKP59-201ENST00000410520 314 ntBASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 RPS29P9-201ENST00000440360 171 ntBASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 MRPL35P2-201ENST00000448009 511 ntBASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 IMMP1LP3-201ENST00000604197 224 ntBASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 AC015914.2-201ENST00000618167 288 ntBASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 AF117829.2-201ENST00000619538 361 ntBASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 AC138965.3-201ENST00000623875 498 ntBASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 AC074101.1-201ENST00000637861 241 ntBASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 DDX18P6-201ENST00000450119 1997 ntBASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 OR4G1P-202ENST00000641173 1788 ntBASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 AP000534.2-201ENST00000412729 568 ntBASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 AC007738.1-201ENST00000413892 348 ntBASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 NPM1P4-201ENST00000414095 812 ntBASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 SCAND3P1-201ENST00000439854 1060 ntBASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 TCEA1P1-201ENST00000449716 880 ntBASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 RPS21P4-201ENST00000487122 248 ntBASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 GTF2F2P1-201ENST00000511083 675 ntBASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 NDUFB4P11-201ENST00000560510 395 ntBASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 AL627230.1-201ENST00000613077 211 ntBASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 AL591926.8-201ENST00000616876 211 ntBASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 AC004808.2-201ENST00000627965 773 ntBASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 SAMMSON-209ENST00000641222 1100 ntBASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 CASC19-264ENST00000641912 1184 ntBASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.64□□□□□ -1.67
RSPO3Q9BXY4 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 AC104623.2-202ENST00000623477 4002 ntBASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 AC007394.1-201ENST00000421941 531 ntBASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 OR2AH1P-201ENST00000425717 928 ntBASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 AC073052.1-201ENST00000440417 714 ntBASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 SUMO2P1-206ENST00000445436 284 ntBASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 IGHV5-78-201ENST00000450948 295 ntBASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 RN7SL443P-201ENST00000464331 290 ntBASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 ENPP7P9-201ENST00000514456 627 ntBASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 AC024940.3-201ENST00000538551 316 ntBASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 AC006272.2-201ENST00000594725 163 ntBASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 AC105254.2-201ENST00000603636 436 ntBASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 AC016769.4-201ENST00000616893 535 ntBASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms