Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MFSD13B-201ENST00000420133 1290 ntBASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 IPPKP1-201ENST00000422501 768 ntBASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 AP006222.1-205ENST00000450734 457 ntBASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 VN1R32P-201ENST00000452234 905 ntBASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 AL445665.1-202ENST00000452436 324 ntBASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 AC016724.1-201ENST00000453215 421 ntBASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 TPT1P1-201ENST00000458495 518 ntBASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 CABYRP1-201ENST00000465493 1045 ntBASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 AL355032.1-201ENST00000472981 438 ntBASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 PFN1P6-201ENST00000476786 399 ntBASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 AC111000.2-201ENST00000507775 550 ntBASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 AC006499.4-201ENST00000510947 694 ntBASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 RN7SKP67-201ENST00000515905 235 ntBASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 RPL12P22-201ENST00000519073 490 ntBASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 MTCYBP41-201ENST00000528913 1123 ntBASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 RFPL1S-203ENST00000539579 330 ntBASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 AL049779.3-201ENST00000557141 606 ntBASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 AP001496.3-201ENST00000580230 913 ntBASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 AP003973.1-201ENST00000604639 691 ntBASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 AC017083.3-201ENST00000609955 700 ntBASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 SNX18P12-201ENST00000624821 759 ntBASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 AC007671.2-201ENST00000637344 619 ntBASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 Z95114.1-201ENST00000624264 14574 ntBASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP1Q96SZ6 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 ZNF876P-202ENST00000398732 1485 ntBASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 AC011503.2-201ENST00000594230 1500 ntBASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 RNA5SP435-201ENST00000364044 108 ntBASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 RN7SKP28-201ENST00000364770 305 ntBASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 AL096800.1-201ENST00000405326 893 ntBASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 AL133264.1-201ENST00000407157 562 ntBASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 RNA5SP251-201ENST00000410614 137 ntBASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 MTCYBP5-201ENST00000423752 1135 ntBASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 AJ239321.1-201ENST00000424255 564 ntBASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 AC126120.1-201ENST00000431082 470 ntBASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 DEFA9P-201ENST00000433042 285 ntBASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 AC090018.1-201ENST00000434369 367 ntBASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 RPL23AP19-201ENST00000436229 369 ntBASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 PCBP2P1-201ENST00000437262 977 ntBASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 AC008945.1-201ENST00000505144 499 ntBASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 AC114781.3-201ENST00000512083 142 ntBASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 MTND5P13-201ENST00000513046 1079 ntBASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 FABP5P12-201ENST00000515543 389 ntBASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 OR4R3P-201ENST00000525084 838 ntBASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 AC130364.2-201ENST00000528639 604 ntBASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 HMGN2P36-201ENST00000529541 409 ntBASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 AC093014.1-201ENST00000548926 724 ntBASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 AC006530.1-201ENST00000555980 571 ntBASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC6.17□□□□□ -1.42
CDK5RAP1Q96SZ6 MIR4260-201ENST00000583107 67 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms