Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 FRG1EP-201ENST00000634469 770 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 AL357140.4-201ENST00000636827 412 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 MIR1910-201ENST00000636955 80 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 OR8G3P-202ENST00000641572 1255 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 BX649567.1-201ENST00000642071 1134 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SNX18Q96RF0 MTCO1P7-201ENST00000419523 1542 ntBASIC5.42□□□□□ -1.54
SNX18Q96RF0 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.42□□□□□ -1.54
SNX18Q96RF0 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNX18Q96RF0 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNX18Q96RF0 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNX18Q96RF0 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNX18Q96RF0 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SNX18Q96RF0 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 AC012078.1-201ENST00000405035 1646 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNX18Q96RF0 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNX18Q96RF0 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SNX18Q96RF0 AC024587.1-201ENST00000505925 2157 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNX18Q96RF0 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 EI24P3-201ENST00000399046 1062 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 RNU4-74P-201ENST00000411280 161 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 RPS7P8-201ENST00000418311 581 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 USP9YP21-201ENST00000420603 432 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 HIGD1AP4-201ENST00000430194 280 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 AC005189.1-201ENST00000431286 310 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNX18Q96RF0 AC069154.1-201ENST00000432914 542 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 AC007679.3-201ENST00000434035 414 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 AC000041.1-201ENST00000439655 175 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 AC023512.1-201ENST00000444513 499 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 AC004022.1-201ENST00000447766 1066 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 ZNF886P-201ENST00000450781 723 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 HMGB1P7-201ENST00000450921 612 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 PTGES3P5-201ENST00000455109 434 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 CST12P-201ENST00000457644 362 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 RPS27AP16-201ENST00000492222 470 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 ZNF519P4-201ENST00000514008 125 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 RNU6-513P-201ENST00000516104 104 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 MRPS36P3-201ENST00000519284 130 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 AL163952.1-202ENST00000569625 600 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 MIR4789-201ENST00000577469 82 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 CCDC58P3-201ENST00000590792 430 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 AC025588.2-201ENST00000604851 466 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 AC107952.2-201ENST00000606048 486 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 AC080013.6-201ENST00000606185 215 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SNX18Q96RF0 AL159169.2-201ENST00000610061 1269 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 AC096708.4-201ENST00000620563 552 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 AP001962.1-201ENST00000624114 559 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 AL355480.1-201ENST00000629041 99 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNX18Q96RF0 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SNX18Q96RF0 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNX18Q96RF0 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNX18Q96RF0 AC005224.3-201ENST00000584683 2140 ntBASIC5.41□□□□□ -1.54
SNX18Q96RF0 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.41□□□□□ -1.54
SNX18Q96RF0 AL132640.2-201ENST00000559968 1698 ntBASIC5.4□□□□□ -1.54
SNX18Q96RF0 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.4□□□□□ -1.54
SNX18Q96RF0 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms