Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.22□□□□□ -1.57
PDLIM5Q96HC4 AC023421.1-201ENST00000590535 1785 ntBASIC5.21□□□□□ -1.57
PDLIM5Q96HC4 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.21□□□□□ -1.57
PDLIM5Q96HC4 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
PDLIM5Q96HC4 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 RN7SKP15-201ENST00000364742 309 ntBASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 RNU1-74P-201ENST00000384108 171 ntBASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 EI24P3-201ENST00000399046 1062 ntBASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 HSPA8P15-201ENST00000401676 786 ntBASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 OR5M12P-201ENST00000423388 929 ntBASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 AC104843.2-201ENST00000427666 297 ntBASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 PRPF38AP1-201ENST00000451976 933 ntBASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 RPL7P45-201ENST00000455851 743 ntBASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 RPL35AP19-201ENST00000469425 329 ntBASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 AC100832.1-201ENST00000471945 383 ntBASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 RN7SL447P-201ENST00000494711 245 ntBASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 AC090568.1-201ENST00000509499 856 ntBASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 AC034244.2-201ENST00000514668 858 ntBASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 HMGB1P40-201ENST00000525121 540 ntBASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 AC008521.2-201ENST00000591021 259 ntBASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 AC015982.1-201ENST00000608113 465 ntBASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 MIR8080-201ENST00000622224 89 ntBASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDLIM5Q96HC4 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 RNU6-225P-201ENST00000384613 103 ntBASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 AC233289.1-201ENST00000403700 508 ntBASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 OR4K12P-201ENST00000406538 961 ntBASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 RPS11P7-201ENST00000442125 465 ntBASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 RSL24D1P2-201ENST00000445584 366 ntBASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 CASP3P1-201ENST00000446037 609 ntBASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 AL627224.1-201ENST00000448334 444 ntBASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 AL591623.2-201ENST00000449978 222 ntBASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 BX842559.2-201ENST00000451418 605 ntBASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 AC243772.1-201ENST00000451620 410 ntBASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 AC144530.1-201ENST00000452862 555 ntBASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 RPL10P17-201ENST00000453852 316 ntBASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 RPL7P6-201ENST00000480903 738 ntBASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 AC021146.7-201ENST00000509604 775 ntBASIC5.2□□□□□ -1.58
PDLIM5Q96HC4 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms