Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 RNU4-4P-201ENST00000364588 130 ntBASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 AL390316.1-201ENST00000406279 553 ntBASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 AC079809.1-201ENST00000415468 276 ntBASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 AL121878.1-201ENST00000418638 859 ntBASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 LYPLA1P1-201ENST00000434514 622 ntBASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 RHOT1P3-201ENST00000436571 331 ntBASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 PSMD10P3-201ENST00000437000 448 ntBASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 RPSAP41-201ENST00000439695 860 ntBASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 RPL34P20-201ENST00000442771 351 ntBASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 CEACAMP7-201ENST00000444105 496 ntBASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 PRPF38AP1-201ENST00000451976 933 ntBASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 OR52E3P-201ENST00000452083 936 ntBASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 AC008410.1-201ENST00000483777 339 ntBASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 HMGN2P25-201ENST00000486956 268 ntBASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 AC005412.2-201ENST00000492004 341 ntBASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 AC147055.3-201ENST00000510547 851 ntBASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 AC019322.1-201ENST00000571869 389 ntBASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 AC027216.1-201ENST00000577726 685 ntBASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 MIR4691-201ENST00000583764 85 ntBASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 AL022394.1-201ENST00000606979 292 ntBASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 SNORA58B-201ENST00000364259 136 ntBASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 SNORA2.3-201ENST00000383920 135 ntBASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 COX5BP7-201ENST00000414780 274 ntBASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 AC013268.2-201ENST00000420753 337 ntBASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 AL354714.3-201ENST00000447284 493 ntBASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 AC104849.1-201ENST00000462623 405 ntBASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 RN7SL443P-201ENST00000464331 290 ntBASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 DEFB109A-201ENST00000482450 265 ntBASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 RN7SL441P-201ENST00000492388 296 ntBASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 RPL37AP8-201ENST00000494116 276 ntBASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 COX6B1P5-201ENST00000509843 249 ntBASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 RN7SKP147-201ENST00000517154 244 ntBASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 OR7E128P-201ENST00000532736 1024 ntBASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 AC007448.1-201ENST00000582714 234 ntBASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 AC105254.2-201ENST00000603636 436 ntBASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 AL021707.7-201ENST00000607991 416 ntBASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 AC091932.2-201ENST00000623014 291 ntBASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 AC005005.4-201ENST00000623789 16698 ntBASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ECHDC3Q96DC8 CASC19-281ENST00000642118 1554 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms