Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
CLHC1Q8NHS4 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CLHC1Q8NHS4 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.96□□□□□ -1.61
CLHC1Q8NHS4 AC092747.4-201ENST00000620519 1861 ntBASIC4.96□□□□□ -1.61
CLHC1Q8NHS4 AC104118.1-201ENST00000607625 1589 ntBASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 RNA5SP339-201ENST00000390987 122 ntBASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 AL035079.1-201ENST00000405210 287 ntBASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 NPM1P40-201ENST00000412758 733 ntBASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 DNAJB5P1-201ENST00000454004 806 ntBASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 AC006349.1-201ENST00000555526 235 ntBASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 AC015982.1-201ENST00000608113 465 ntBASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 AC118658.2-201ENST00000618697 459 ntBASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 AC005840.5-201ENST00000619166 599 ntBASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 AL450326.2-201ENST00000421913 1962 ntBASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.96□□□□□ -1.62
CLHC1Q8NHS4 OR55B1P-203ENST00000641518 2602 ntBASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 CUL4AP1-201ENST00000514750 1863 ntBASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 AL390316.1-201ENST00000406279 553 ntBASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 MIR1282-201ENST00000408865 101 ntBASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 AL390774.1-201ENST00000411924 246 ntBASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 CTSL3P-202ENST00000412179 788 ntBASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 AC211486.3-201ENST00000412694 621 ntBASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 VN1R3-201ENST00000418822 919 ntBASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 AL133325.1-201ENST00000421090 382 ntBASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 CYCSP12-201ENST00000437729 300 ntBASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 MTND6P18-201ENST00000439477 513 ntBASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 PTMAP3-201ENST00000447474 330 ntBASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 BX842559.2-201ENST00000451418 605 ntBASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 RPL7P45-201ENST00000455851 743 ntBASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 RN7SL447P-201ENST00000494711 245 ntBASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 RN7SL466P-201ENST00000497546 295 ntBASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 SNORD39.2-201ENST00000579995 76 ntBASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 AC015849.6-201ENST00000605454 474 ntBASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 AL008729.2-201ENST00000606393 473 ntBASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 AC126175.1-201ENST00000617041 758 ntBASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 AP001962.1-201ENST00000624114 559 ntBASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 AC100778.3-201ENST00000580060 1750 ntBASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.95□□□□□ -1.62
CLHC1Q8NHS4 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms