Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 OR1F2P-201ENST00000570470 933 ntBASIC4.4□□□□□ -1.71
CLDND2Q8NHS1 AC016839.1-201ENST00000578162 867 ntBASIC4.4□□□□□ -1.71
CLDND2Q8NHS1 MIR4700-201ENST00000578311 74 ntBASIC4.4□□□□□ -1.71
CLDND2Q8NHS1 MIR4436B2-201ENST00000581415 91 ntBASIC4.4□□□□□ -1.71
CLDND2Q8NHS1 MIR4436B1-201ENST00000583272 91 ntBASIC4.4□□□□□ -1.71
CLDND2Q8NHS1 AC011447.4-201ENST00000587562 111 ntBASIC4.4□□□□□ -1.71
CLDND2Q8NHS1 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.4□□□□□ -1.71
CLDND2Q8NHS1 AC108738.1-201ENST00000603703 237 ntBASIC4.4□□□□□ -1.71
CLDND2Q8NHS1 AC009597.2-201ENST00000604659 592 ntBASIC4.4□□□□□ -1.71
CLDND2Q8NHS1 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.4□□□□□ -1.71
CLDND2Q8NHS1 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.4□□□□□ -1.71
CLDND2Q8NHS1 uc_338.7-201ENST00000621834 124 ntBASIC4.4□□□□□ -1.71
CLDND2Q8NHS1 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.4□□□□□ -1.71
CLDND2Q8NHS1 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CLDND2Q8NHS1 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
CLDND2Q8NHS1 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CLDND2Q8NHS1 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
CLDND2Q8NHS1 AC068870.3-201ENST00000625077 2536 ntBASIC4.4□□□□□ -1.71
CLDND2Q8NHS1 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.4□□□□□ -1.71
CLDND2Q8NHS1 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.4□□□□□ -1.71
CLDND2Q8NHS1 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLDND2Q8NHS1 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLDND2Q8NHS1 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.4□□□□□ -1.71
CLDND2Q8NHS1 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
CLDND2Q8NHS1 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 AL022393.1-201ENST00000625142 1677 ntBASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 MIR585-201ENST00000384887 94 ntBASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 NPM1P38-201ENST00000403835 865 ntBASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 RN7SKP97-201ENST00000410966 333 ntBASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 RBMY2QP-201ENST00000429799 1147 ntBASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 AL772161.1-201ENST00000439130 476 ntBASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 RNA5SP103-201ENST00000459503 118 ntBASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 RPL35AP28-201ENST00000459730 331 ntBASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 AC110775.1-201ENST00000513721 462 ntBASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 AC012400.1-201ENST00000518452 381 ntBASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 OR5D15P-201ENST00000531671 942 ntBASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 AC093591.2-201ENST00000565254 3843 ntBASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 AC023389.2-201ENST00000580031 955 ntBASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 AC097063.1-201ENST00000426714 1797 ntBASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 AC011447.7-201ENST00000624228 1590 ntBASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.39□□□□□ -1.71
CLDND2Q8NHS1 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 AL672167.1-204ENST00000641875 3017 ntBASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 AC007996.1-201ENST00000620414 2821 ntBASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 AC023421.1-201ENST00000590535 1785 ntBASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 PANDAR-201ENST00000629595 1506 ntBASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 AC103591.2-201ENST00000265259 766 ntBASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 U3.3-201ENST00000362986 216 ntBASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 RNU1-146P-201ENST00000364015 165 ntBASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 UBBP2-201ENST00000376781 231 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms