Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC50Q8IVM0 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC50Q8IVM0 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC50Q8IVM0 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC50Q8IVM0 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CCDC50Q8IVM0 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CCDC50Q8IVM0 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC50Q8IVM0 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC50Q8IVM0 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 RNU1-74P-201ENST00000384108 171 ntBASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 CBX1P3-201ENST00000413296 527 ntBASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 RPS29P10-201ENST00000439197 166 ntBASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 VN1R96P-201ENST00000446052 858 ntBASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 RPL7P45-201ENST00000455851 743 ntBASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 AC091180.1-201ENST00000462104 372 ntBASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 AC112206.1-201ENST00000468416 477 ntBASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 AC091544.1-201ENST00000484702 348 ntBASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 RN7SL547P-201ENST00000490793 290 ntBASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 MTATP6P1-201ENST00000514057 681 ntBASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 TCP11X3P-202ENST00000514289 1254 ntBASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 RN7SKP5-201ENST00000517045 272 ntBASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 AC022882.1-201ENST00000532142 501 ntBASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 RN7SL52P-201ENST00000584271 284 ntBASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 AC233280.2-201ENST00000603917 1070 ntBASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 RNA5SP440-201ENST00000612665 119 ntBASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 AL357153.4-201ENST00000620487 1016 ntBASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 CYP4F35P-202ENST00000636121 390 ntBASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CCDC50Q8IVM0 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 AC027279.1-201ENST00000568885 4284 ntBASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 RNU6-249P-201ENST00000363016 102 ntBASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 RNU1-146P-201ENST00000364015 165 ntBASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 RNA5SP90-201ENST00000364801 99 ntBASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 RNA5SP339-201ENST00000390987 122 ntBASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 CYCSP12-201ENST00000437729 300 ntBASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 CYCSP34-201ENST00000458172 304 ntBASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 AL133445.1-201ENST00000467051 452 ntBASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 AC020779.1-201ENST00000478757 796 ntBASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 RN7SL466P-201ENST00000497546 295 ntBASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 RNU6-941P-201ENST00000516346 108 ntBASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 RNA5SP373-201ENST00000517271 95 ntBASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 AC012400.1-201ENST00000518452 381 ntBASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 MIR3614-201ENST00000581261 86 ntBASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 SNORD91B-202ENST00000608459 222 ntBASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 AL451049.1-201ENST00000608672 497 ntBASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 AC004477.3-201ENST00000614061 590 ntBASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 MIR8069-1-201ENST00000616627 86 ntBASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 AC126175.1-201ENST00000617041 758 ntBASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 AC005840.5-201ENST00000619166 599 ntBASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 MIR8069-2-201ENST00000621412 86 ntBASIC5.41□□□□□ -1.54
CCDC50Q8IVM0 SAMMSON-209ENST00000641222 1100 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms