Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AL035246.1-201ENST00000433554 1255 ntBASIC3.44□□□□□ -1.86
PRKDCP78527 GOT2P5-201ENST00000433995 546 ntBASIC3.44□□□□□ -1.86
PRKDCP78527 CYCSP32-201ENST00000440548 321 ntBASIC3.44□□□□□ -1.86
PRKDCP78527 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.44□□□□□ -1.86
PRKDCP78527 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.44□□□□□ -1.86
PRKDCP78527 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PRKDCP78527 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.44□□□□□ -1.86
PRKDCP78527 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.44□□□□□ -1.86
PRKDCP78527 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PRKDCP78527 ARHGEF11-202ENST00000368194 6889 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
PRKDCP78527 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC3.44□□□□□ -1.86
PRKDCP78527 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
PRKDCP78527 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PRKDCP78527 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
PRKDCP78527 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
PRKDCP78527 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PRKDCP78527 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC3.44□□□□□ -1.86
PRKDCP78527 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
PRKDCP78527 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.44□□□□□ -1.86
PRKDCP78527 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC3.44□□□□□ -1.86
PRKDCP78527 AC022336.1-201ENST00000475510 337 ntBASIC3.44□□□□□ -1.86
PRKDCP78527 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PRKDCP78527 AP000619.3-201ENST00000535634 1127 ntBASIC3.44□□□□□ -1.86
PRKDCP78527 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.44□□□□□ -1.86
PRKDCP78527 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.44□□□□□ -1.86
PRKDCP78527 AC012468.1-201ENST00000604888 430 ntBASIC3.44□□□□□ -1.86
PRKDCP78527 AL049794.2-201ENST00000616301 365 ntBASIC3.44□□□□□ -1.86
PRKDCP78527 MIR8059-201ENST00000620427 81 ntBASIC3.44□□□□□ -1.86
PRKDCP78527 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC3.44□□□□□ -1.86
PRKDCP78527 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC3.44□□□□□ -1.86
PRKDCP78527 AC004817.4-201ENST00000602396 3625 ntBASIC3.44□□□□□ -1.86
PRKDCP78527 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PRKDCP78527 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
PRKDCP78527 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
PRKDCP78527 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PRKDCP78527 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PRKDCP78527 PTMAP2-201ENST00000397627 327 ntBASIC3.44□□□□□ -1.86
PRKDCP78527 IGKV1OR9-1-201ENST00000424370 284 ntBASIC3.44□□□□□ -1.86
PRKDCP78527 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.44□□□□□ -1.86
PRKDCP78527 RPS24P16-201ENST00000497294 392 ntBASIC3.44□□□□□ -1.86
PRKDCP78527 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.44□□□□□ -1.86
PRKDCP78527 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.44□□□□□ -1.86
PRKDCP78527 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.44□□□□□ -1.86
PRKDCP78527 AC009093.8-201ENST00000641769 292 ntBASIC3.44□□□□□ -1.86
PRKDCP78527 TENM2-205ENST00000519204 9427 ntTSL 5 BASIC3.44□□□□□ -1.86
PRKDCP78527 AL031595.3-201ENST00000624919 14262 ntBASIC3.44□□□□□ -1.86
PRKDCP78527 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC3.44□□□□□ -1.86
PRKDCP78527 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PRKDCP78527 AC016251.2-201ENST00000623393 3089 ntBASIC3.43□□□□□ -1.86
PRKDCP78527 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PRKDCP78527 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC3.43□□□□□ -1.86
PRKDCP78527 Y_RNA.111-201ENST00000363248 100 ntBASIC3.43□□□□□ -1.86
PRKDCP78527 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
PRKDCP78527 RN7SKP16-201ENST00000410180 299 ntBASIC3.43□□□□□ -1.86
PRKDCP78527 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.43□□□□□ -1.86
PRKDCP78527 CRIP1P1-201ENST00000427567 185 ntBASIC3.43□□□□□ -1.86
PRKDCP78527 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.43□□□□□ -1.86
PRKDCP78527 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.43□□□□□ -1.86
PRKDCP78527 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.43□□□□□ -1.86
PRKDCP78527 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.43□□□□□ -1.86
PRKDCP78527 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC3.43□□□□□ -1.86
PRKDCP78527 AC068769.1-201ENST00000474767 2426 ntBASIC3.43□□□□□ -1.86
PRKDCP78527 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
PRKDCP78527 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PRKDCP78527 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC3.43□□□□□ -1.86
PRKDCP78527 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PRKDCP78527 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC3.43□□□□□ -1.86
PRKDCP78527 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC3.43□□□□□ -1.86
PRKDCP78527 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
PRKDCP78527 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC3.43□□□□□ -1.86
PRKDCP78527 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.43□□□□□ -1.86
PRKDCP78527 RNA5SP130-201ENST00000364431 114 ntBASIC3.43□□□□□ -1.86
PRKDCP78527 RNU1-82P-201ENST00000390851 165 ntBASIC3.43□□□□□ -1.86
PRKDCP78527 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PRKDCP78527 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.43□□□□□ -1.86
PRKDCP78527 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC3.43□□□□□ -1.86
PRKDCP78527 AL136231.1-201ENST00000429407 730 ntBASIC3.43□□□□□ -1.86
PRKDCP78527 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.43□□□□□ -1.86
PRKDCP78527 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC3.43□□□□□ -1.86
PRKDCP78527 TMX2P1-201ENST00000436507 708 ntBASIC3.43□□□□□ -1.86
PRKDCP78527 RPL17P2-201ENST00000491913 451 ntBASIC3.43□□□□□ -1.86
PRKDCP78527 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.43□□□□□ -1.86
PRKDCP78527 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC3.43□□□□□ -1.86
PRKDCP78527 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PRKDCP78527 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC3.43□□□□□ -1.86
PRKDCP78527 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PRKDCP78527 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
PRKDCP78527 STK3-216ENST00000523601 3107 ntTSL 2 BASIC3.43□□□□□ -1.86
PRKDCP78527 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.43□□□□□ -1.86
PRKDCP78527 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
PRKDCP78527 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PRKDCP78527 TMSB10P2-201ENST00000416049 131 ntBASIC3.43□□□□□ -1.86
PRKDCP78527 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PRKDCP78527 AC096754.1-201ENST00000508904 818 ntBASIC3.43□□□□□ -1.86
PRKDCP78527 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.43□□□□□ -1.86
PRKDCP78527 GAPDHP62-201ENST00000515313 990 ntBASIC3.43□□□□□ -1.86
PRKDCP78527 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
PRKDCP78527 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC3.43□□□□□ -1.86
PRKDCP78527 RN7SL652P-201ENST00000577769 300 ntBASIC3.43□□□□□ -1.86
PRKDCP78527 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms