Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RPS4XP62701 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPS4XP62701 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RPS4XP62701 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPS4XP62701 RNA5SP507-201ENST00000363603 121 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 RN7SKP153-201ENST00000365026 316 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RPS4XP62701 GABARAPL3-201ENST00000412799 354 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 RPL12P9-201ENST00000412942 488 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.81□□□□□ -1.64
RPS4XP62701 AL356806.1-201ENST00000422524 916 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 REREP1Y-201ENST00000422655 198 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 NANOGP4-201ENST00000427230 913 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 RPL7L1P9-201ENST00000431298 745 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.81□□□□□ -1.64
RPS4XP62701 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.81□□□□□ -1.64
RPS4XP62701 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.81□□□□□ -1.64
RPS4XP62701 CYCSP6-201ENST00000434498 302 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 CYCSP12-201ENST00000437729 300 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 REREP2Y-201ENST00000439103 200 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.81□□□□□ -1.64
RPS4XP62701 SBDSP1-204ENST00000453858 737 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 RPL7P45-201ENST00000455851 743 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.81□□□□□ -1.64
RPS4XP62701 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.81□□□□□ -1.64
RPS4XP62701 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.81□□□□□ -1.64
RPS4XP62701 UBA52P7-201ENST00000486088 380 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 COX6B1P2-201ENST00000489624 230 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 AC022133.1-201ENST00000490961 571 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 RPS23P1-201ENST00000491662 432 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 AL049874.2-201ENST00000492636 288 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.81□□□□□ -1.64
RPS4XP62701 AC147055.3-201ENST00000510547 851 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.81□□□□□ -1.64
RPS4XP62701 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.81□□□□□ -1.64
RPS4XP62701 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.81□□□□□ -1.64
RPS4XP62701 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.81□□□□□ -1.64
RPS4XP62701 AC026616.1-201ENST00000523157 525 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.81□□□□□ -1.64
RPS4XP62701 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.81□□□□□ -1.64
RPS4XP62701 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RPS4XP62701 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.81□□□□□ -1.64
RPS4XP62701 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.81□□□□□ -1.64
RPS4XP62701 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.81□□□□□ -1.64
RPS4XP62701 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.81□□□□□ -1.64
RPS4XP62701 LSM1P2-201ENST00000604911 322 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 RPSAP73-201ENST00000614820 330 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 AC009032.1-201ENST00000617574 431 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 AC015722.2-201ENST00000622210 551 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 AC015660.5-201ENST00000623238 564 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 AC119674.1-220ENST00000641502 1048 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
RPS4XP62701 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPS4XP62701 AL034549.2-201ENST00000618285 3373 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPS4XP62701 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.81□□□□□ -1.64
RPS4XP62701 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPS4XP62701 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPS4XP62701 AC004158.1-201ENST00000564508 4319 ntBASIC4.81□□□□□ -1.64
RPS4XP62701 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPS4XP62701 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
RPS4XP62701 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPS4XP62701 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RPS4XP62701 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPS4XP62701 AC073429.2-201ENST00000569694 1444 ntBASIC4.8□□□□□ -1.64
RPS4XP62701 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RPS4XP62701 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
RPS4XP62701 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.8□□□□□ -1.64
RPS4XP62701 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPS4XP62701 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.8□□□□□ -1.64
RPS4XP62701 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.8□□□□□ -1.64
RPS4XP62701 TRIM51GP-201ENST00000534741 1350 ntBASIC4.8□□□□□ -1.64
RPS4XP62701 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPS4XP62701 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPS4XP62701 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RPS4XP62701 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
RPS4XP62701 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RPS4XP62701 AL360270.2-201ENST00000562952 5985 ntBASIC4.8□□□□□ -1.64
RPS4XP62701 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPS4XP62701 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPS4XP62701 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPS4XP62701 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.8□□□□□ -1.64
RPS4XP62701 AC010132.2-201ENST00000295493 1043 ntBASIC4.8□□□□□ -1.64
RPS4XP62701 AC005294.1-201ENST00000355509 281 ntBASIC4.8□□□□□ -1.64
RPS4XP62701 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RPS4XP62701 RPL35AP24-201ENST00000413846 330 ntBASIC4.8□□□□□ -1.64
RPS4XP62701 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.8□□□□□ -1.64
RPS4XP62701 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.8□□□□□ -1.64
RPS4XP62701 AC006455.6-201ENST00000426192 893 ntBASIC4.8□□□□□ -1.64
RPS4XP62701 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.8□□□□□ -1.64
RPS4XP62701 AL139148.1-201ENST00000427122 680 ntBASIC4.8□□□□□ -1.64
RPS4XP62701 NPM1P22-201ENST00000427761 952 ntBASIC4.8□□□□□ -1.64
RPS4XP62701 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.8□□□□□ -1.64
RPS4XP62701 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.8□□□□□ -1.64
RPS4XP62701 ARL5AP3-201ENST00000439327 386 ntBASIC4.8□□□□□ -1.64
RPS4XP62701 CNOT7P2-201ENST00000441051 832 ntBASIC4.8□□□□□ -1.64
RPS4XP62701 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.8□□□□□ -1.64
RPS4XP62701 NOP56P2-201ENST00000447491 769 ntBASIC4.8□□□□□ -1.64
RPS4XP62701 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.8□□□□□ -1.64
RPS4XP62701 AC058823.1-201ENST00000485315 474 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms