Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 CDC123-202ENST00000378900 933 ntTSL 5 BASIC3.7□□□□□ -1.82
CKS1BP61024 SNORA48.4-201ENST00000391089 134 ntBASIC3.7□□□□□ -1.82
CKS1BP61024 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.7□□□□□ -1.82
CKS1BP61024 AL359885.1-201ENST00000415786 903 ntBASIC3.7□□□□□ -1.82
CKS1BP61024 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC3.7□□□□□ -1.82
CKS1BP61024 EIF4A1P1-201ENST00000420241 934 ntBASIC3.7□□□□□ -1.82
CKS1BP61024 CYP4F29P-201ENST00000420685 446 ntBASIC3.7□□□□□ -1.82
CKS1BP61024 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC3.7□□□□□ -1.82
CKS1BP61024 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CKS1BP61024 ATP6V1E1P1-201ENST00000439215 681 ntBASIC3.7□□□□□ -1.82
CKS1BP61024 RPL12P49-201ENST00000441100 121 ntBASIC3.7□□□□□ -1.82
CKS1BP61024 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC3.7□□□□□ -1.82
CKS1BP61024 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.7□□□□□ -1.82
CKS1BP61024 TAAR4P-201ENST00000454843 1039 ntBASIC3.7□□□□□ -1.82
CKS1BP61024 CYCSP34-201ENST00000458172 304 ntBASIC3.7□□□□□ -1.82
CKS1BP61024 S100A11P1-201ENST00000477525 312 ntBASIC3.7□□□□□ -1.82
CKS1BP61024 AC022215.1-201ENST00000481770 362 ntBASIC3.7□□□□□ -1.82
CKS1BP61024 AC022133.1-201ENST00000490961 571 ntBASIC3.7□□□□□ -1.82
CKS1BP61024 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC3.7□□□□□ -1.82
CKS1BP61024 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC3.7□□□□□ -1.82
CKS1BP61024 DUTP7-201ENST00000507982 486 ntBASIC3.7□□□□□ -1.82
CKS1BP61024 MRPS5P3-201ENST00000515577 166 ntBASIC3.7□□□□□ -1.82
CKS1BP61024 CDC42P3-201ENST00000518493 633 ntBASIC3.7□□□□□ -1.82
CKS1BP61024 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.7□□□□□ -1.82
CKS1BP61024 BUD31P1-201ENST00000521828 359 ntBASIC3.7□□□□□ -1.82
CKS1BP61024 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC3.7□□□□□ -1.82
CKS1BP61024 IGHVIII-76-1-201ENST00000523776 286 ntBASIC3.7□□□□□ -1.82
CKS1BP61024 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC3.7□□□□□ -1.82
CKS1BP61024 HMGN2P36-201ENST00000529541 409 ntBASIC3.7□□□□□ -1.82
CKS1BP61024 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC3.7□□□□□ -1.82
CKS1BP61024 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC3.7□□□□□ -1.82
CKS1BP61024 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC3.7□□□□□ -1.82
CKS1BP61024 MED21-206ENST00000546323 575 ntTSL 3 BASIC3.7□□□□□ -1.82
CKS1BP61024 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC3.7□□□□□ -1.82
CKS1BP61024 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.7□□□□□ -1.82
CKS1BP61024 AC006530.1-201ENST00000555980 571 ntBASIC3.7□□□□□ -1.82
CKS1BP61024 AC018552.3-201ENST00000567416 561 ntBASIC3.7□□□□□ -1.82
CKS1BP61024 MIR4502-201ENST00000580432 81 ntBASIC3.7□□□□□ -1.82
CKS1BP61024 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC3.7□□□□□ -1.82
CKS1BP61024 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC3.7□□□□□ -1.82
CKS1BP61024 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC3.7□□□□□ -1.82
CKS1BP61024 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC3.7□□□□□ -1.82
CKS1BP61024 AC005828.7-201ENST00000607331 556 ntBASIC3.7□□□□□ -1.82
CKS1BP61024 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC3.7□□□□□ -1.82
CKS1BP61024 AC097505.1-201ENST00000610199 565 ntBASIC3.7□□□□□ -1.82
CKS1BP61024 MIR6774-201ENST00000614651 70 ntBASIC3.7□□□□□ -1.82
CKS1BP61024 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC3.7□□□□□ -1.82
CKS1BP61024 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CKS1BP61024 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CKS1BP61024 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CKS1BP61024 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CKS1BP61024 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC3.7□□□□□ -1.82
CKS1BP61024 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
CKS1BP61024 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.7□□□□□ -1.82
CKS1BP61024 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CKS1BP61024 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC3.7□□□□□ -1.82
CKS1BP61024 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CKS1BP61024 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.69□□□□□ -1.82
CKS1BP61024 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CKS1BP61024 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.69□□□□□ -1.82
CKS1BP61024 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.69□□□□□ -1.82
CKS1BP61024 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CKS1BP61024 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.69□□□□□ -1.82
CKS1BP61024 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.69□□□□□ -1.82
CKS1BP61024 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CKS1BP61024 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC3.69□□□□□ -1.82
CKS1BP61024 Z98755.1-201ENST00000407015 1384 ntBASIC3.69□□□□□ -1.82
CKS1BP61024 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.69□□□□□ -1.82
CKS1BP61024 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CKS1BP61024 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CKS1BP61024 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CKS1BP61024 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CKS1BP61024 RN7SKP104-201ENST00000362605 328 ntBASIC3.69□□□□□ -1.82
CKS1BP61024 OR1L6-202ENST00000373684 1044 ntBASIC3.69□□□□□ -1.82
CKS1BP61024 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC3.69□□□□□ -1.82
CKS1BP61024 SNORA51.9-201ENST00000384295 124 ntBASIC3.69□□□□□ -1.82
CKS1BP61024 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC3.69□□□□□ -1.82
CKS1BP61024 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CKS1BP61024 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.69□□□□□ -1.82
CKS1BP61024 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.69□□□□□ -1.82
CKS1BP61024 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC3.69□□□□□ -1.82
CKS1BP61024 Z82198.3-201ENST00000421145 199 ntBASIC3.69□□□□□ -1.82
CKS1BP61024 EIF4EP1-201ENST00000422311 642 ntBASIC3.69□□□□□ -1.82
CKS1BP61024 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC3.69□□□□□ -1.82
CKS1BP61024 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC3.69□□□□□ -1.82
CKS1BP61024 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC3.69□□□□□ -1.82
CKS1BP61024 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC3.69□□□□□ -1.82
CKS1BP61024 RPL19P16-201ENST00000433839 588 ntBASIC3.69□□□□□ -1.82
CKS1BP61024 AC064862.5-201ENST00000440618 334 ntBASIC3.69□□□□□ -1.82
CKS1BP61024 AP000281.1-201ENST00000444036 316 ntBASIC3.69□□□□□ -1.82
CKS1BP61024 AC016772.1-201ENST00000444170 1261 ntBASIC3.69□□□□□ -1.82
CKS1BP61024 AL035551.1-201ENST00000446931 348 ntBASIC3.69□□□□□ -1.82
CKS1BP61024 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CKS1BP61024 AL596266.1-201ENST00000448132 400 ntBASIC3.69□□□□□ -1.82
CKS1BP61024 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC3.69□□□□□ -1.82
CKS1BP61024 CEACAMP11-201ENST00000455211 583 ntBASIC3.69□□□□□ -1.82
CKS1BP61024 ACA64.1-201ENST00000459171 127 ntBASIC3.69□□□□□ -1.82
CKS1BP61024 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CKS1BP61024 AC087672.1-201ENST00000479876 766 ntBASIC3.69□□□□□ -1.82
CKS1BP61024 RN7SL447P-201ENST00000494711 245 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms