Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 AC009094.1-201ENST00000564443 426 ntBASIC4.56□□□□□ -1.68
ERVFC1-1P60608 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 AC092718.4-201ENST00000566639 716 ntBASIC4.56□□□□□ -1.68
ERVFC1-1P60608 MIR4732-201ENST00000581873 76 ntBASIC4.56□□□□□ -1.68
ERVFC1-1P60608 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 AP005136.2-201ENST00000583253 1049 ntBASIC4.56□□□□□ -1.68
ERVFC1-1P60608 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 AC010620.1-201ENST00000601088 1102 ntBASIC4.56□□□□□ -1.68
ERVFC1-1P60608 AL353778.1-201ENST00000603149 408 ntBASIC4.56□□□□□ -1.68
ERVFC1-1P60608 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 RN7SL261P-201ENST00000613441 282 ntBASIC4.56□□□□□ -1.68
ERVFC1-1P60608 AC015819.1-201ENST00000613588 663 ntBASIC4.56□□□□□ -1.68
ERVFC1-1P60608 VN1R9P-201ENST00000614184 867 ntBASIC4.56□□□□□ -1.68
ERVFC1-1P60608 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 AC105105.5-201ENST00000622635 1294 ntBASIC4.56□□□□□ -1.68
ERVFC1-1P60608 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 AC017037.3-201ENST00000625016 472 ntBASIC4.56□□□□□ -1.68
ERVFC1-1P60608 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 LYARP1-201ENST00000436977 1501 ntBASIC4.56□□□□□ -1.68
ERVFC1-1P60608 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
ERVFC1-1P60608 AC217777.1-201ENST00000570034 1471 ntBASIC4.56□□□□□ -1.68
ERVFC1-1P60608 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 AL359715.4-201ENST00000606629 1436 ntBASIC4.55□□□□□ -1.68
ERVFC1-1P60608 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 RNU1-5P-201ENST00000362684 144 ntBASIC4.55□□□□□ -1.68
ERVFC1-1P60608 RNU4-44P-201ENST00000363050 141 ntBASIC4.55□□□□□ -1.68
ERVFC1-1P60608 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 MIR621-201ENST00000384919 96 ntBASIC4.55□□□□□ -1.68
ERVFC1-1P60608 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 AL603865.2-201ENST00000401679 213 ntBASIC4.55□□□□□ -1.68
ERVFC1-1P60608 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 USP9YP21-201ENST00000420603 432 ntBASIC4.55□□□□□ -1.68
ERVFC1-1P60608 PRUNEP1-201ENST00000425846 705 ntBASIC4.55□□□□□ -1.68
ERVFC1-1P60608 DEFB130D-201ENST00000426866 237 ntBASIC4.55□□□□□ -1.68
ERVFC1-1P60608 TRBV29OR9-2-201ENST00000427589 333 ntBASIC4.55□□□□□ -1.68
ERVFC1-1P60608 RPL34P6-201ENST00000432390 345 ntBASIC4.55□□□□□ -1.68
ERVFC1-1P60608 ATP6V1G1P4-201ENST00000438388 335 ntBASIC4.55□□□□□ -1.68
ERVFC1-1P60608 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 E2F6P3-201ENST00000441743 743 ntBASIC4.55□□□□□ -1.68
ERVFC1-1P60608 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 RPL6P30-201ENST00000443382 862 ntBASIC4.55□□□□□ -1.68
ERVFC1-1P60608 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 ZNF886P-201ENST00000450781 723 ntBASIC4.55□□□□□ -1.68
ERVFC1-1P60608 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 YRDCP3-201ENST00000456507 480 ntBASIC4.55□□□□□ -1.68
ERVFC1-1P60608 AC092691.2-201ENST00000461787 803 ntBASIC4.55□□□□□ -1.68
ERVFC1-1P60608 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 RPSAP37-201ENST00000470913 821 ntBASIC4.55□□□□□ -1.68
ERVFC1-1P60608 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 RN7SL836P-201ENST00000476140 296 ntBASIC4.55□□□□□ -1.68
ERVFC1-1P60608 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 RPS12P31-201ENST00000491419 398 ntBASIC4.55□□□□□ -1.68
ERVFC1-1P60608 AC015524.1-201ENST00000491585 472 ntBASIC4.55□□□□□ -1.68
ERVFC1-1P60608 AC093890.1-201ENST00000502554 540 ntBASIC4.55□□□□□ -1.68
ERVFC1-1P60608 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.55□□□□□ -1.68
ERVFC1-1P60608 NACAP5-201ENST00000509863 636 ntBASIC4.55□□□□□ -1.68
ERVFC1-1P60608 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms