Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AP005403.1-201ENST00000579720 229 ntBASIC5.73□□□□□ -1.49
HDAC4P56524 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
HDAC4P56524 MIMT1-201ENST00000597105 1050 ntBASIC5.73□□□□□ -1.49
HDAC4P56524 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.73□□□□□ -1.49
HDAC4P56524 AL451049.1-201ENST00000608672 497 ntBASIC5.73□□□□□ -1.49
HDAC4P56524 AC135803.1-201ENST00000608748 565 ntBASIC5.73□□□□□ -1.49
HDAC4P56524 AC126175.1-201ENST00000617041 758 ntBASIC5.73□□□□□ -1.49
HDAC4P56524 MIR6826-201ENST00000617808 98 ntBASIC5.73□□□□□ -1.49
HDAC4P56524 RNU6-368P-201ENST00000620928 107 ntBASIC5.73□□□□□ -1.49
HDAC4P56524 RNU6-538P-201ENST00000622329 107 ntBASIC5.73□□□□□ -1.49
HDAC4P56524 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.73□□□□□ -1.49
HDAC4P56524 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.73□□□□□ -1.49
HDAC4P56524 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HDAC4P56524 AC093591.2-201ENST00000565254 3843 ntBASIC5.73□□□□□ -1.49
HDAC4P56524 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.73□□□□□ -1.49
HDAC4P56524 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.72□□□□□ -1.49
HDAC4P56524 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
HDAC4P56524 AP001029.2-203ENST00000589795 4910 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HDAC4P56524 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.72□□□□□ -1.49
HDAC4P56524 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 AC107021.2-201ENST00000567714 2095 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.72□□□□□ -1.49
HDAC4P56524 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.72□□□□□ -1.49
HDAC4P56524 RN7SKP74-201ENST00000362849 309 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 RN7SKP145-201ENST00000363291 303 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HDAC4P56524 SNORA16A-201ENST00000384342 137 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 RNA5SP105-201ENST00000391123 113 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.72□□□□□ -1.49
HDAC4P56524 AL133482.1-201ENST00000415988 498 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 GLUD1P9-201ENST00000420997 1173 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.72□□□□□ -1.49
HDAC4P56524 DSTNP5-201ENST00000427921 523 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.72□□□□□ -1.49
HDAC4P56524 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.72□□□□□ -1.49
HDAC4P56524 AL390119.1-201ENST00000440329 312 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.72□□□□□ -1.49
HDAC4P56524 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.72□□□□□ -1.49
HDAC4P56524 VN1R48P-201ENST00000448149 1036 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 BUD31P2-201ENST00000449374 300 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 YWHAEP1-201ENST00000453697 763 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 AP002345.1-201ENST00000456493 928 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
HDAC4P56524 RPS4XP12-201ENST00000461747 709 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 AC023424.1-201ENST00000496058 459 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 AC008638.1-201ENST00000506035 866 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 HMGB1P47-201ENST00000511281 589 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.72□□□□□ -1.49
HDAC4P56524 SEPT10P1-201ENST00000517342 1162 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.72□□□□□ -1.49
HDAC4P56524 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 AC079064.1-201ENST00000528365 362 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 AP003049.1-201ENST00000529418 457 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.72□□□□□ -1.49
HDAC4P56524 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.72□□□□□ -1.49
HDAC4P56524 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.72□□□□□ -1.49
HDAC4P56524 LSM3P2-201ENST00000551246 273 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 CR383656.14-201ENST00000551951 406 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.72□□□□□ -1.49
HDAC4P56524 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
HDAC4P56524 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.72□□□□□ -1.49
HDAC4P56524 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.72□□□□□ -1.49
HDAC4P56524 FO393422.1-201ENST00000603908 708 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HDAC4P56524 BNIP3P41-202ENST00000616656 861 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 AC132068.1-201ENST00000623805 459 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 AC021766.1-201ENST00000624404 741 ntBASIC5.72□□□□□ -1.49
HDAC4P56524 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.72□□□□□ -1.49
HDAC4P56524 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HDAC4P56524 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.72□□□□□ -1.49
HDAC4P56524 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.72□□□□□ -1.49
HDAC4P56524 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.72□□□□□ -1.49
HDAC4P56524 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HDAC4P56524 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HDAC4P56524 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HDAC4P56524 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
HDAC4P56524 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
HDAC4P56524 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.71□□□□□ -1.5
HDAC4P56524 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
HDAC4P56524 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.71□□□□□ -1.5
HDAC4P56524 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HDAC4P56524 RNA5SP234-201ENST00000363916 119 ntBASIC5.71□□□□□ -1.5
HDAC4P56524 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HDAC4P56524 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.71□□□□□ -1.5
HDAC4P56524 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.71□□□□□ -1.5
HDAC4P56524 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.71□□□□□ -1.5
HDAC4P56524 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.71□□□□□ -1.5
HDAC4P56524 AL359265.1-201ENST00000440296 795 ntBASIC5.71□□□□□ -1.5
HDAC4P56524 MED28P3-201ENST00000444288 531 ntBASIC5.71□□□□□ -1.5
HDAC4P56524 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.71□□□□□ -1.5
HDAC4P56524 AL035090.1-201ENST00000454835 332 ntBASIC5.71□□□□□ -1.5
HDAC4P56524 MTND2P30-201ENST00000456663 382 ntBASIC5.71□□□□□ -1.5
HDAC4P56524 PSAT1P4-201ENST00000466500 526 ntBASIC5.71□□□□□ -1.5
HDAC4P56524 AC015908.1-201ENST00000478739 476 ntBASIC5.71□□□□□ -1.5
HDAC4P56524 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HDAC4P56524 AC025768.1-201ENST00000510057 267 ntBASIC5.71□□□□□ -1.5
HDAC4P56524 RPL7L1P4-201ENST00000513004 707 ntBASIC5.71□□□□□ -1.5
HDAC4P56524 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms