Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL159169.2-201ENST00000610061 1269 ntBASIC5.16□□□□□ -1.58
CDH12P55289 RNU6-1192P-201ENST00000612197 107 ntBASIC5.16□□□□□ -1.58
CDH12P55289 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH12P55289 AC244100.4-201ENST00000617747 388 ntBASIC5.16□□□□□ -1.58
CDH12P55289 RNU6-489P-201ENST00000618289 107 ntBASIC5.16□□□□□ -1.58
CDH12P55289 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH12P55289 AL356863.1-201ENST00000623378 1080 ntBASIC5.16□□□□□ -1.58
CDH12P55289 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.16□□□□□ -1.58
CDH12P55289 AL109659.3-201ENST00000624985 950 ntBASIC5.16□□□□□ -1.58
CDH12P55289 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH12P55289 AL590396.4-201ENST00000636779 956 ntBASIC5.16□□□□□ -1.58
CDH12P55289 OR6C71P-202ENST00000641886 1107 ntBASIC5.16□□□□□ -1.58
CDH12P55289 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CDH12P55289 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CDH12P55289 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH12P55289 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH12P55289 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH12P55289 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CDH12P55289 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH12P55289 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH12P55289 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.58
CDH12P55289 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDH12P55289 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDH12P55289 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CDH12P55289 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CDH12P55289 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CDH12P55289 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDH12P55289 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
CDH12P55289 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CDH12P55289 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.15□□□□□ -1.58
CDH12P55289 AP000473.2-201ENST00000602659 1537 ntBASIC5.15□□□□□ -1.58
CDH12P55289 MTHFD2P5-201ENST00000320415 844 ntBASIC5.15□□□□□ -1.59
CDH12P55289 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDH12P55289 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH12P55289 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH12P55289 SUGT1P2-201ENST00000379452 992 ntBASIC5.15□□□□□ -1.59
CDH12P55289 SNORD56.6-201ENST00000384569 71 ntBASIC5.15□□□□□ -1.59
CDH12P55289 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH12P55289 RPSAP35-201ENST00000413753 818 ntBASIC5.15□□□□□ -1.59
CDH12P55289 AK4P4-201ENST00000419465 646 ntBASIC5.15□□□□□ -1.59
CDH12P55289 MTCO1P43-201ENST00000431831 488 ntBASIC5.15□□□□□ -1.59
CDH12P55289 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH12P55289 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH12P55289 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH12P55289 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.15□□□□□ -1.59
CDH12P55289 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH12P55289 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH12P55289 AZGP1P2-201ENST00000454506 345 ntBASIC5.15□□□□□ -1.59
CDH12P55289 UBFD1P1-201ENST00000473259 814 ntBASIC5.15□□□□□ -1.59
CDH12P55289 AC116562.1-201ENST00000485355 781 ntBASIC5.15□□□□□ -1.59
CDH12P55289 AC010374.1-201ENST00000503762 1237 ntBASIC5.15□□□□□ -1.59
CDH12P55289 AC098862.1-201ENST00000504991 413 ntBASIC5.15□□□□□ -1.59
CDH12P55289 DUTP7-201ENST00000507982 486 ntBASIC5.15□□□□□ -1.59
CDH12P55289 AC090568.1-201ENST00000509499 856 ntBASIC5.15□□□□□ -1.59
CDH12P55289 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDH12P55289 AC114781.3-201ENST00000512083 142 ntBASIC5.15□□□□□ -1.59
CDH12P55289 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH12P55289 AC034205.1-201ENST00000520621 638 ntBASIC5.15□□□□□ -1.59
CDH12P55289 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH12P55289 TRIM51DP-201ENST00000529746 596 ntBASIC5.15□□□□□ -1.59
CDH12P55289 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.15□□□□□ -1.59
CDH12P55289 AC068305.2-201ENST00000550567 1205 ntBASIC5.15□□□□□ -1.59
CDH12P55289 HSPE1P2-201ENST00000554777 306 ntBASIC5.15□□□□□ -1.59
CDH12P55289 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH12P55289 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.15□□□□□ -1.59
CDH12P55289 AP001160.4-201ENST00000596971 382 ntBASIC5.15□□□□□ -1.59
CDH12P55289 AC063977.5-201ENST00000601044 974 ntBASIC5.15□□□□□ -1.59
CDH12P55289 AL445435.1-201ENST00000604232 665 ntBASIC5.15□□□□□ -1.59
CDH12P55289 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.15□□□□□ -1.59
CDH12P55289 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.15□□□□□ -1.59
CDH12P55289 AC105105.5-201ENST00000622635 1294 ntBASIC5.15□□□□□ -1.59
CDH12P55289 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.15□□□□□ -1.59
CDH12P55289 AL596275.2-207ENST00000641188 675 ntBASIC5.15□□□□□ -1.59
CDH12P55289 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CDH12P55289 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH12P55289 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.15□□□□□ -1.59
CDH12P55289 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH12P55289 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
CDH12P55289 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH12P55289 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH12P55289 AC007842.1-201ENST00000597336 2039 ntBASIC5.14□□□□□ -1.59
CDH12P55289 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH12P55289 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
CDH12P55289 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CDH12P55289 AC097063.1-201ENST00000426714 1797 ntBASIC5.14□□□□□ -1.59
CDH12P55289 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDH12P55289 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDH12P55289 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH12P55289 GAPDHP24-201ENST00000328713 983 ntBASIC5.14□□□□□ -1.59
CDH12P55289 RNA5SP30-201ENST00000365552 115 ntBASIC5.14□□□□□ -1.59
CDH12P55289 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CDH12P55289 RNU6-207P-201ENST00000384137 107 ntBASIC5.14□□□□□ -1.59
CDH12P55289 NACAP7-201ENST00000407371 609 ntBASIC5.14□□□□□ -1.59
CDH12P55289 Z68694.1-201ENST00000413929 841 ntBASIC5.14□□□□□ -1.59
CDH12P55289 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH12P55289 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CDH12P55289 AL035660.1-201ENST00000422041 222 ntBASIC5.14□□□□□ -1.59
CDH12P55289 AC006065.1-201ENST00000422539 802 ntBASIC5.14□□□□□ -1.59
CDH12P55289 REREP1Y-201ENST00000422655 198 ntBASIC5.14□□□□□ -1.59
CDH12P55289 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms