Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
PDX1P52945 SNORA56-201ENST00000383966 129 ntBASIC5.2□□□□□ -1.58
PDX1P52945 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.2□□□□□ -1.58
PDX1P52945 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.2□□□□□ -1.58
PDX1P52945 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.2□□□□□ -1.58
PDX1P52945 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.2□□□□□ -1.58
PDX1P52945 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDX1P52945 AC093655.2-201ENST00000425735 631 ntBASIC5.2□□□□□ -1.58
PDX1P52945 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.2□□□□□ -1.58
PDX1P52945 FAR1P1-201ENST00000427163 934 ntBASIC5.2□□□□□ -1.58
PDX1P52945 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC5.2□□□□□ -1.58
PDX1P52945 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.2□□□□□ -1.58
PDX1P52945 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.2□□□□□ -1.58
PDX1P52945 LINC02210-201ENST00000444561 288 ntBASIC5.2□□□□□ -1.58
PDX1P52945 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.2□□□□□ -1.58
PDX1P52945 AL672138.1-201ENST00000450604 1015 ntBASIC5.2□□□□□ -1.58
PDX1P52945 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
PDX1P52945 ATP5LP5-201ENST00000483050 299 ntBASIC5.2□□□□□ -1.58
PDX1P52945 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.2□□□□□ -1.58
PDX1P52945 AC105420.1-201ENST00000504389 582 ntBASIC5.2□□□□□ -1.58
PDX1P52945 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.2□□□□□ -1.58
PDX1P52945 AC092593.2-201ENST00000513866 913 ntBASIC5.2□□□□□ -1.58
PDX1P52945 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.2□□□□□ -1.58
PDX1P52945 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.2□□□□□ -1.58
PDX1P52945 AC013701.1-201ENST00000522657 465 ntBASIC5.2□□□□□ -1.58
PDX1P52945 AP001922.4-201ENST00000526967 290 ntBASIC5.2□□□□□ -1.58
PDX1P52945 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDX1P52945 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.2□□□□□ -1.58
PDX1P52945 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.2□□□□□ -1.58
PDX1P52945 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.2□□□□□ -1.58
PDX1P52945 AP005403.1-201ENST00000579720 229 ntBASIC5.2□□□□□ -1.58
PDX1P52945 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.2□□□□□ -1.58
PDX1P52945 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.2□□□□□ -1.58
PDX1P52945 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.2□□□□□ -1.58
PDX1P52945 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDX1P52945 AC084036.1-201ENST00000609190 508 ntBASIC5.2□□□□□ -1.58
PDX1P52945 AC074276.2-201ENST00000619891 348 ntBASIC5.2□□□□□ -1.58
PDX1P52945 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PDX1P52945 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.2□□□□□ -1.58
PDX1P52945 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDX1P52945 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
PDX1P52945 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDX1P52945 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.2□□□□□ -1.58
PDX1P52945 AC144833.1-201ENST00000567953 4089 ntBASIC5.2□□□□□ -1.58
PDX1P52945 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDX1P52945 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.2□□□□□ -1.58
PDX1P52945 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDX1P52945 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDX1P52945 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDX1P52945 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDX1P52945 AC006206.1-201ENST00000544842 3387 ntBASIC5.19□□□□□ -1.58
PDX1P52945 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.19□□□□□ -1.58
PDX1P52945 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.19□□□□□ -1.58
PDX1P52945 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.19□□□□□ -1.58
PDX1P52945 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDX1P52945 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.19□□□□□ -1.58
PDX1P52945 AC093909.5-201ENST00000621839 1799 ntBASIC5.19□□□□□ -1.58
PDX1P52945 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PDX1P52945 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
PDX1P52945 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDX1P52945 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDX1P52945 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDX1P52945 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PDX1P52945 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PDX1P52945 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDX1P52945 SNORA17.1-201ENST00000362945 126 ntBASIC5.19□□□□□ -1.58
PDX1P52945 SNORA27.3-201ENST00000364937 134 ntBASIC5.19□□□□□ -1.58
PDX1P52945 RN7SKP186-201ENST00000365371 303 ntBASIC5.19□□□□□ -1.58
PDX1P52945 MIR421-201ENST00000365696 85 ntBASIC5.19□□□□□ -1.58
PDX1P52945 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.19□□□□□ -1.58
PDX1P52945 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDX1P52945 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDX1P52945 NACAP7-201ENST00000407371 609 ntBASIC5.19□□□□□ -1.58
PDX1P52945 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.19□□□□□ -1.58
PDX1P52945 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.19□□□□□ -1.58
PDX1P52945 RNA5SP487-201ENST00000410186 122 ntBASIC5.19□□□□□ -1.58
PDX1P52945 MTCO1P45-201ENST00000431457 267 ntBASIC5.19□□□□□ -1.58
PDX1P52945 MTND4LP7-201ENST00000431728 294 ntBASIC5.19□□□□□ -1.58
PDX1P52945 MTND2P40-201ENST00000436718 841 ntBASIC5.19□□□□□ -1.58
PDX1P52945 AL772161.1-201ENST00000439130 476 ntBASIC5.19□□□□□ -1.58
PDX1P52945 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.19□□□□□ -1.58
PDX1P52945 Z80107.2-201ENST00000445127 392 ntBASIC5.19□□□□□ -1.58
PDX1P52945 AC023271.1-201ENST00000445936 1090 ntBASIC5.19□□□□□ -1.58
PDX1P52945 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.19□□□□□ -1.58
PDX1P52945 DNAJB5P1-201ENST00000454004 806 ntBASIC5.19□□□□□ -1.58
PDX1P52945 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.19□□□□□ -1.58
PDX1P52945 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.19□□□□□ -1.58
PDX1P52945 AC108751.3-201ENST00000461814 1020 ntBASIC5.19□□□□□ -1.58
PDX1P52945 RN7SL197P-201ENST00000466981 299 ntBASIC5.19□□□□□ -1.58
PDX1P52945 AC108043.1-201ENST00000512696 574 ntBASIC5.19□□□□□ -1.58
PDX1P52945 SCARNA16.4-201ENST00000516956 187 ntBASIC5.19□□□□□ -1.58
PDX1P52945 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.19□□□□□ -1.58
PDX1P52945 AL121839.1-201ENST00000556233 1185 ntBASIC5.19□□□□□ -1.58
PDX1P52945 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.19□□□□□ -1.58
PDX1P52945 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.19□□□□□ -1.58
PDX1P52945 AC092868.3-201ENST00000560515 784 ntBASIC5.19□□□□□ -1.58
PDX1P52945 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.19□□□□□ -1.58
PDX1P52945 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.19□□□□□ -1.58
PDX1P52945 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.19□□□□□ -1.58
PDX1P52945 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms