Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 AL078599.1-201ENST00000402075 293 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 RPS24P12-201ENST00000402084 394 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 ATF1P1-201ENST00000406040 927 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXA1P49639 AC096533.1-201ENST00000411645 353 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.69□□□□□ -1.66
HOXA1P49639 NENFP1-201ENST00000419476 466 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 AL034379.1-201ENST00000423216 253 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 VN1R20P-201ENST00000425215 966 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXA1P49639 AL445928.1-201ENST00000435545 222 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 AL359265.1-201ENST00000440296 795 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 AC064862.5-201ENST00000440618 334 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 RRM2P4-201ENST00000441721 562 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 AC023141.8-201ENST00000442554 208 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 RPL6P30-201ENST00000443382 862 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXA1P49639 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.69□□□□□ -1.66
HOXA1P49639 AL590004.3-202ENST00000445883 451 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXA1P49639 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HOXA1P49639 AL591473.1-201ENST00000464297 313 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXA1P49639 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXA1P49639 RN7SL612P-201ENST00000497704 295 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 AC114322.1-201ENST00000506771 926 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXA1P49639 AC108103.1-201ENST00000511286 446 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXA1P49639 MRPS5P3-201ENST00000515577 166 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 RNU2-45P-201ENST00000516068 187 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 SNORA19.3-201ENST00000516165 130 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXA1P49639 AC026407.1-201ENST00000518369 204 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXA1P49639 AC021451.1-201ENST00000523498 1129 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXA1P49639 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXA1P49639 ASB8-203ENST00000535988 679 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXA1P49639 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXA1P49639 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXA1P49639 AGGF1P5-201ENST00000567900 919 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXA1P49639 EIF1P5-201ENST00000585002 234 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 AC008507.2-201ENST00000588402 1176 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXA1P49639 AC124856.1-201ENST00000600819 896 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 MTCO2P22-201ENST00000603246 681 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 AC011891.2-201ENST00000604949 397 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXA1P49639 AP001033.2-201ENST00000609701 1003 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXA1P49639 LINC00901.1-201ENST00000617252 152 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HOXA1P49639 AL512652.1-201ENST00000619006 500 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXA1P49639 AL356863.1-201ENST00000623378 1080 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXA1P49639 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXA1P49639 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXA1P49639 AL022322.2-201ENST00000624072 20397 ntBASIC4.69□□□□□ -1.66
HOXA1P49639 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXA1P49639 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXA1P49639 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXA1P49639 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXA1P49639 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
HOXA1P49639 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXA1P49639 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXA1P49639 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.68□□□□□ -1.66
HOXA1P49639 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXA1P49639 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
HOXA1P49639 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HOXA1P49639 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HOXA1P49639 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.68□□□□□ -1.66
HOXA1P49639 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HOXA1P49639 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HOXA1P49639 MTHFD2P5-201ENST00000320415 844 ntBASIC4.68□□□□□ -1.66
HOXA1P49639 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXA1P49639 RNA5SP91-201ENST00000390902 119 ntBASIC4.68□□□□□ -1.66
HOXA1P49639 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXA1P49639 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXA1P49639 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXA1P49639 RPL26P37-201ENST00000411983 438 ntBASIC4.68□□□□□ -1.66
HOXA1P49639 AL133482.1-201ENST00000415988 498 ntBASIC4.68□□□□□ -1.66
HOXA1P49639 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXA1P49639 CYCSP10-201ENST00000417973 294 ntBASIC4.68□□□□□ -1.66
HOXA1P49639 RPS4XP5-201ENST00000419038 768 ntBASIC4.68□□□□□ -1.66
HOXA1P49639 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXA1P49639 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXA1P49639 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXA1P49639 NDUFA5P10-201ENST00000432147 357 ntBASIC4.68□□□□□ -1.66
HOXA1P49639 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXA1P49639 MTND2P2-201ENST00000434633 945 ntBASIC4.68□□□□□ -1.66
HOXA1P49639 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXA1P49639 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXA1P49639 AC015983.1-201ENST00000441577 373 ntBASIC4.68□□□□□ -1.66
HOXA1P49639 HMGB3P9-201ENST00000441799 583 ntBASIC4.68□□□□□ -1.66
HOXA1P49639 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXA1P49639 AL009048.1-201ENST00000450437 298 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms