Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.51□□□□□ -1.53
LHX1P48742 AL442128.2-201ENST00000620246 1824 ntBASIC5.51□□□□□ -1.53
LHX1P48742 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.51□□□□□ -1.53
LHX1P48742 SNURFL-201ENST00000309296 343 ntBASIC5.51□□□□□ -1.53
LHX1P48742 RNU6-670P-201ENST00000364312 104 ntBASIC5.51□□□□□ -1.53
LHX1P48742 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LHX1P48742 MIR7-1-201ENST00000384871 110 ntBASIC5.51□□□□□ -1.53
LHX1P48742 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
LHX1P48742 GPS2P1-201ENST00000411761 986 ntBASIC5.51□□□□□ -1.53
LHX1P48742 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.51□□□□□ -1.53
LHX1P48742 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.51□□□□□ -1.53
LHX1P48742 FAM204CP-201ENST00000424489 642 ntBASIC5.51□□□□□ -1.53
LHX1P48742 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LHX1P48742 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.51□□□□□ -1.53
LHX1P48742 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.51□□□□□ -1.53
LHX1P48742 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.51□□□□□ -1.53
LHX1P48742 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.51□□□□□ -1.53
LHX1P48742 AC008410.1-201ENST00000483777 339 ntBASIC5.51□□□□□ -1.53
LHX1P48742 RPL32P9-201ENST00000487963 407 ntBASIC5.51□□□□□ -1.53
LHX1P48742 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.51□□□□□ -1.53
LHX1P48742 AC105420.1-201ENST00000504389 582 ntBASIC5.51□□□□□ -1.53
LHX1P48742 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.51□□□□□ -1.53
LHX1P48742 AC117525.1-201ENST00000515228 503 ntBASIC5.51□□□□□ -1.53
LHX1P48742 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.51□□□□□ -1.53
LHX1P48742 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.51□□□□□ -1.53
LHX1P48742 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.51□□□□□ -1.53
LHX1P48742 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.51□□□□□ -1.53
LHX1P48742 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.51□□□□□ -1.53
LHX1P48742 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.51□□□□□ -1.53
LHX1P48742 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.51□□□□□ -1.53
LHX1P48742 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.51□□□□□ -1.53
LHX1P48742 BX323046.1-201ENST00000610145 535 ntBASIC5.51□□□□□ -1.53
LHX1P48742 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LHX1P48742 AC241377.1-201ENST00000619797 406 ntBASIC5.51□□□□□ -1.53
LHX1P48742 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.51□□□□□ -1.53
LHX1P48742 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.51□□□□□ -1.53
LHX1P48742 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.51□□□□□ -1.53
LHX1P48742 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LHX1P48742 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LHX1P48742 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.51□□□□□ -1.53
LHX1P48742 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
LHX1P48742 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
LHX1P48742 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.51□□□□□ -1.53
LHX1P48742 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LHX1P48742 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LHX1P48742 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
LHX1P48742 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.51□□□□□ -1.53
LHX1P48742 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LHX1P48742 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.5□□□□□ -1.53
LHX1P48742 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
LHX1P48742 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LHX1P48742 AC007342.5-201ENST00000571340 2142 ntBASIC5.5□□□□□ -1.53
LHX1P48742 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LHX1P48742 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LHX1P48742 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.5□□□□□ -1.53
LHX1P48742 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LHX1P48742 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LHX1P48742 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LHX1P48742 RNA5SP223-201ENST00000365174 120 ntBASIC5.5□□□□□ -1.53
LHX1P48742 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
LHX1P48742 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.5□□□□□ -1.53
LHX1P48742 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.5□□□□□ -1.53
LHX1P48742 AC006455.6-201ENST00000426192 893 ntBASIC5.5□□□□□ -1.53
LHX1P48742 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.5□□□□□ -1.53
LHX1P48742 TRIM60P13-201ENST00000432350 1283 ntBASIC5.5□□□□□ -1.53
LHX1P48742 AC092647.3-201ENST00000443044 633 ntBASIC5.5□□□□□ -1.53
LHX1P48742 GAPDHP14-201ENST00000450472 937 ntBASIC5.5□□□□□ -1.53
LHX1P48742 RN7SL610P-201ENST00000463845 291 ntBASIC5.5□□□□□ -1.53
LHX1P48742 AC007688.1-201ENST00000475592 759 ntBASIC5.5□□□□□ -1.53
LHX1P48742 RN7SL97P-201ENST00000486780 299 ntBASIC5.5□□□□□ -1.53
LHX1P48742 RN7SL808P-201ENST00000496066 299 ntBASIC5.5□□□□□ -1.53
LHX1P48742 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.5□□□□□ -1.53
LHX1P48742 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.5□□□□□ -1.53
LHX1P48742 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.5□□□□□ -1.53
LHX1P48742 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.5□□□□□ -1.53
LHX1P48742 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.5□□□□□ -1.53
LHX1P48742 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.5□□□□□ -1.53
LHX1P48742 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.5□□□□□ -1.53
LHX1P48742 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.5□□□□□ -1.53
LHX1P48742 AC015660.5-201ENST00000623238 564 ntBASIC5.5□□□□□ -1.53
LHX1P48742 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LHX1P48742 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
LHX1P48742 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.5□□□□□ -1.53
LHX1P48742 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
LHX1P48742 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.5□□□□□ -1.53
LHX1P48742 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LHX1P48742 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.5□□□□□ -1.53
LHX1P48742 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LHX1P48742 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LHX1P48742 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.5□□□□□ -1.53
LHX1P48742 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LHX1P48742 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LHX1P48742 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.49□□□□□ -1.53
LHX1P48742 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.49□□□□□ -1.53
LHX1P48742 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.49□□□□□ -1.53
LHX1P48742 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.49□□□□□ -1.53
LHX1P48742 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.49□□□□□ -1.53
LHX1P48742 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.49□□□□□ -1.53
LHX1P48742 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.49□□□□□ -1.53
LHX1P48742 RNU6-618P-201ENST00000363518 112 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms