Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL12P48061 AC068790.7-201ENST00000602347 528 ntBASIC5.1□□□□□ -1.59
CXCL12P48061 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL12P48061 AL034374.2-201ENST00000605281 548 ntBASIC5.1□□□□□ -1.59
CXCL12P48061 AC021106.3-201ENST00000623925 531 ntBASIC5.1□□□□□ -1.59
CXCL12P48061 AC016542.2-201ENST00000624201 619 ntBASIC5.1□□□□□ -1.59
CXCL12P48061 AC069542.2-201ENST00000624816 216 ntBASIC5.1□□□□□ -1.59
CXCL12P48061 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.1□□□□□ -1.59
CXCL12P48061 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.1□□□□□ -1.59
CXCL12P48061 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CXCL12P48061 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL12P48061 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL12P48061 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
CXCL12P48061 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
CXCL12P48061 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.1□□□□□ -1.59
CXCL12P48061 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL12P48061 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CXCL12P48061 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.09□□□□□ -1.59
CXCL12P48061 AC100757.1-201ENST00000616872 1835 ntBASIC5.09□□□□□ -1.59
CXCL12P48061 AC090220.1-201ENST00000593078 1699 ntBASIC5.09□□□□□ -1.59
CXCL12P48061 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CXCL12P48061 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CXCL12P48061 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CXCL12P48061 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
CXCL12P48061 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CXCL12P48061 AC003973.3-201ENST00000624863 2822 ntBASIC5.09□□□□□ -1.59
CXCL12P48061 U3.28-201ENST00000391249 210 ntBASIC5.09□□□□□ -1.59
CXCL12P48061 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.09□□□□□ -1.59
CXCL12P48061 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CXCL12P48061 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.09□□□□□ -1.59
CXCL12P48061 HSPE1P27-201ENST00000430808 296 ntBASIC5.09□□□□□ -1.59
CXCL12P48061 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.09□□□□□ -1.59
CXCL12P48061 IGHV5-78-201ENST00000450948 295 ntBASIC5.09□□□□□ -1.59
CXCL12P48061 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.09□□□□□ -1.59
CXCL12P48061 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.09□□□□□ -1.59
CXCL12P48061 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.09□□□□□ -1.59
CXCL12P48061 RN7SKP276-201ENST00000516242 268 ntBASIC5.09□□□□□ -1.59
CXCL12P48061 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.09□□□□□ -1.59
CXCL12P48061 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CXCL12P48061 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.09□□□□□ -1.59
CXCL12P48061 AL139124.1-201ENST00000609123 421 ntBASIC5.09□□□□□ -1.59
CXCL12P48061 AL352984.2-202ENST00000613699 155 ntBASIC5.09□□□□□ -1.59
CXCL12P48061 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CXCL12P48061 AC021422.1-201ENST00000621212 473 ntBASIC5.09□□□□□ -1.59
CXCL12P48061 AL359757.1-201ENST00000623176 255 ntBASIC5.09□□□□□ -1.59
CXCL12P48061 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.09□□□□□ -1.59
CXCL12P48061 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CXCL12P48061 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CXCL12P48061 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CXCL12P48061 AC007159.1-201ENST00000566529 4706 ntBASIC5.09□□□□□ -1.59
CXCL12P48061 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CXCL12P48061 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.09□□□□□ -1.59
CXCL12P48061 AC011504.1-201ENST00000623331 4103 ntBASIC5.09□□□□□ -1.59
CXCL12P48061 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CXCL12P48061 AC083837.1-201ENST00000565297 2994 ntBASIC5.09□□□□□ -1.6
CXCL12P48061 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
CXCL12P48061 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.09□□□□□ -1.6
CXCL12P48061 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
CXCL12P48061 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CXCL12P48061 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCL12P48061 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.08□□□□□ -1.6
CXCL12P48061 AP001157.1-201ENST00000550837 2339 ntBASIC5.08□□□□□ -1.6
CXCL12P48061 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CXCL12P48061 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.08□□□□□ -1.6
CXCL12P48061 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
CXCL12P48061 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.08□□□□□ -1.6
CXCL12P48061 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCL12P48061 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.08□□□□□ -1.6
CXCL12P48061 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCL12P48061 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCL12P48061 AL049693.1-201ENST00000402760 611 ntBASIC5.08□□□□□ -1.6
CXCL12P48061 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.08□□□□□ -1.6
CXCL12P48061 CENPIP1-201ENST00000425713 902 ntBASIC5.08□□□□□ -1.6
CXCL12P48061 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.08□□□□□ -1.6
CXCL12P48061 MTCYBP21-201ENST00000443300 1113 ntBASIC5.08□□□□□ -1.6
CXCL12P48061 TXNP2-201ENST00000443918 295 ntBASIC5.08□□□□□ -1.6
CXCL12P48061 REG1CP-206ENST00000447469 496 ntBASIC5.08□□□□□ -1.6
CXCL12P48061 AC007537.2-201ENST00000472093 511 ntBASIC5.08□□□□□ -1.6
CXCL12P48061 AC020779.1-201ENST00000478757 796 ntBASIC5.08□□□□□ -1.6
CXCL12P48061 RPL7P41-201ENST00000485823 957 ntBASIC5.08□□□□□ -1.6
CXCL12P48061 AK3P4-201ENST00000504283 583 ntBASIC5.08□□□□□ -1.6
CXCL12P48061 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.08□□□□□ -1.6
CXCL12P48061 MORF4L1P3-201ENST00000525966 950 ntBASIC5.08□□□□□ -1.6
CXCL12P48061 OR4A17P-201ENST00000526032 904 ntBASIC5.08□□□□□ -1.6
CXCL12P48061 OR4A43P-201ENST00000532938 908 ntBASIC5.08□□□□□ -1.6
CXCL12P48061 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.08□□□□□ -1.6
CXCL12P48061 AP001880.2-201ENST00000538233 448 ntBASIC5.08□□□□□ -1.6
CXCL12P48061 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.08□□□□□ -1.6
CXCL12P48061 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.08□□□□□ -1.6
CXCL12P48061 AL139041.1-201ENST00000605480 610 ntBASIC5.08□□□□□ -1.6
CXCL12P48061 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.08□□□□□ -1.6
CXCL12P48061 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.08□□□□□ -1.6
CXCL12P48061 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCL12P48061 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.08□□□□□ -1.6
CXCL12P48061 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CXCL12P48061 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CXCL12P48061 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CXCL12P48061 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.08□□□□□ -1.6
CXCL12P48061 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCL12P48061 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms