Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.69□□□□□ -1.5
MMP13P45452 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.69□□□□□ -1.5
MMP13P45452 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.69□□□□□ -1.5
MMP13P45452 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.69□□□□□ -1.5
MMP13P45452 AC079148.1-201ENST00000565944 819 ntBASIC5.69□□□□□ -1.5
MMP13P45452 MRPS21P7-201ENST00000566937 238 ntBASIC5.69□□□□□ -1.5
MMP13P45452 MIR3614-201ENST00000581261 86 ntBASIC5.69□□□□□ -1.5
MMP13P45452 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.69□□□□□ -1.5
MMP13P45452 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.69□□□□□ -1.5
MMP13P45452 AC135178.6-201ENST00000605314 398 ntBASIC5.69□□□□□ -1.5
MMP13P45452 AL450270.1-201ENST00000606160 391 ntBASIC5.69□□□□□ -1.5
MMP13P45452 RNU6-84P-201ENST00000607737 102 ntBASIC5.69□□□□□ -1.5
MMP13P45452 AC106052.1-201ENST00000608029 497 ntBASIC5.69□□□□□ -1.5
MMP13P45452 AC025574.2-201ENST00000615621 514 ntBASIC5.69□□□□□ -1.5
MMP13P45452 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.69□□□□□ -1.5
MMP13P45452 AP000943.4-201ENST00000622912 357 ntBASIC5.69□□□□□ -1.5
MMP13P45452 AC007683.2-201ENST00000624681 714 ntBASIC5.69□□□□□ -1.5
MMP13P45452 AC103703.1-201ENST00000634783 663 ntBASIC5.69□□□□□ -1.5
MMP13P45452 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.69□□□□□ -1.5
MMP13P45452 AC008691.1-209ENST00000642094 814 ntBASIC5.69□□□□□ -1.5
MMP13P45452 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.69□□□□□ -1.5
MMP13P45452 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
MMP13P45452 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
MMP13P45452 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.68□□□□□ -1.5
MMP13P45452 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
MMP13P45452 AL360270.2-201ENST00000562952 5985 ntBASIC5.68□□□□□ -1.5
MMP13P45452 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
MMP13P45452 AC144833.1-201ENST00000567953 4089 ntBASIC5.68□□□□□ -1.5
MMP13P45452 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
MMP13P45452 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
MMP13P45452 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.68□□□□□ -1.5
MMP13P45452 CDY17P-201ENST00000414121 1282 ntBASIC5.68□□□□□ -1.5
MMP13P45452 AL596448.1-201ENST00000415024 392 ntBASIC5.68□□□□□ -1.5
MMP13P45452 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.68□□□□□ -1.5
MMP13P45452 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.68□□□□□ -1.5
MMP13P45452 AL133173.1-201ENST00000423458 397 ntBASIC5.68□□□□□ -1.5
MMP13P45452 HSPD1P12-201ENST00000429127 1069 ntBASIC5.68□□□□□ -1.5
MMP13P45452 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.68□□□□□ -1.5
MMP13P45452 FMO7P-201ENST00000436045 768 ntBASIC5.68□□□□□ -1.5
MMP13P45452 MTND2P22-201ENST00000444325 1033 ntBASIC5.68□□□□□ -1.5
MMP13P45452 AL161636.2-201ENST00000445179 927 ntBASIC5.68□□□□□ -1.5
MMP13P45452 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.68□□□□□ -1.5
MMP13P45452 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
MMP13P45452 VDAC2P4-201ENST00000452925 711 ntBASIC5.68□□□□□ -1.5
MMP13P45452 PPIAP19-201ENST00000486414 492 ntBASIC5.68□□□□□ -1.5
MMP13P45452 PRELID3BP6-201ENST00000503839 571 ntBASIC5.68□□□□□ -1.5
MMP13P45452 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.68□□□□□ -1.5
MMP13P45452 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.68□□□□□ -1.5
MMP13P45452 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.68□□□□□ -1.5
MMP13P45452 RN7SKP265-201ENST00000516448 223 ntBASIC5.68□□□□□ -1.5
MMP13P45452 AC034205.1-201ENST00000520621 638 ntBASIC5.68□□□□□ -1.5
MMP13P45452 AC092709.1-201ENST00000521355 1045 ntBASIC5.68□□□□□ -1.5
MMP13P45452 AC023538.1-201ENST00000534576 736 ntBASIC5.68□□□□□ -1.5
MMP13P45452 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.68□□□□□ -1.5
MMP13P45452 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.68□□□□□ -1.5
MMP13P45452 AC011270.1-201ENST00000558606 583 ntBASIC5.68□□□□□ -1.5
MMP13P45452 RBM22P12-201ENST00000567098 1255 ntBASIC5.68□□□□□ -1.5
MMP13P45452 AC005951.1-201ENST00000576706 485 ntBASIC5.68□□□□□ -1.5
MMP13P45452 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.68□□□□□ -1.5
MMP13P45452 MTCYBP13-201ENST00000578634 1093 ntBASIC5.68□□□□□ -1.5
MMP13P45452 H3F3BP2-201ENST00000583907 357 ntBASIC5.68□□□□□ -1.5
MMP13P45452 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.68□□□□□ -1.5
MMP13P45452 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.68□□□□□ -1.5
MMP13P45452 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.68□□□□□ -1.5
MMP13P45452 OR51C1P-201ENST00000608504 942 ntBASIC5.68□□□□□ -1.5
MMP13P45452 AC100847.1-201ENST00000611316 481 ntBASIC5.68□□□□□ -1.5
MMP13P45452 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.68□□□□□ -1.5
MMP13P45452 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.68□□□□□ -1.5
MMP13P45452 AC119674.1-220ENST00000641502 1048 ntBASIC5.68□□□□□ -1.5
MMP13P45452 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
MMP13P45452 AL078621.3-201ENST00000623707 2042 ntBASIC5.68□□□□□ -1.5
MMP13P45452 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.68□□□□□ -1.5
MMP13P45452 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.68□□□□□ -1.5
MMP13P45452 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
MMP13P45452 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.68□□□□□ -1.5
MMP13P45452 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.68□□□□□ -1.5
MMP13P45452 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.68□□□□□ -1.5
MMP13P45452 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.68□□□□□ -1.5
MMP13P45452 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
MMP13P45452 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
MMP13P45452 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
MMP13P45452 LINC01963-201ENST00000562038 3148 ntBASIC5.68□□□□□ -1.5
MMP13P45452 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
MMP13P45452 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
MMP13P45452 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
MMP13P45452 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
MMP13P45452 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
MMP13P45452 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
MMP13P45452 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
MMP13P45452 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
MMP13P45452 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.67□□□□□ -1.5
MMP13P45452 OR9K1P-201ENST00000326513 941 ntBASIC5.67□□□□□ -1.5
MMP13P45452 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
MMP13P45452 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.67□□□□□ -1.5
MMP13P45452 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
MMP13P45452 RN7SKP286-201ENST00000410894 299 ntBASIC5.67□□□□□ -1.5
MMP13P45452 OR6E1P-201ENST00000414424 923 ntBASIC5.67□□□□□ -1.5
MMP13P45452 COX5BP7-201ENST00000414780 274 ntBASIC5.67□□□□□ -1.5
MMP13P45452 OR2X1P-201ENST00000421144 687 ntBASIC5.67□□□□□ -1.5
MMP13P45452 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 146.4 ms