Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.28□□□□□ -1.56
HTTP42858 BX005214.3-202ENST00000619809 325 ntBASIC5.28□□□□□ -1.56
HTTP42858 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
HTTP42858 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HTTP42858 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HTTP42858 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HTTP42858 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
HTTP42858 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.28□□□□□ -1.56
HTTP42858 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HTTP42858 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HTTP42858 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC5.28□□□□□ -1.56
HTTP42858 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HTTP42858 AC233968.1-201ENST00000611212 1300 ntBASIC5.28□□□□□ -1.56
HTTP42858 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
HTTP42858 AC002525.1-201ENST00000624392 1622 ntBASIC5.28□□□□□ -1.56
HTTP42858 AL356095.1-201ENST00000417217 199 ntBASIC5.28□□□□□ -1.56
HTTP42858 AC092651.1-201ENST00000426110 312 ntBASIC5.28□□□□□ -1.56
HTTP42858 SCAND3P1-201ENST00000439854 1060 ntBASIC5.28□□□□□ -1.56
HTTP42858 TAAR4P-201ENST00000454843 1039 ntBASIC5.28□□□□□ -1.56
HTTP42858 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.28□□□□□ -1.56
HTTP42858 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
HTTP42858 ZNF137P-201ENST00000456718 1920 ntBASIC5.27□□□□□ -1.57
HTTP42858 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HTTP42858 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HTTP42858 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
HTTP42858 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
HTTP42858 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HTTP42858 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.27□□□□□ -1.57
HTTP42858 MIR383-201ENST00000362257 73 ntBASIC5.27□□□□□ -1.57
HTTP42858 AC091868.1-201ENST00000508746 304 ntBASIC5.27□□□□□ -1.57
HTTP42858 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.27□□□□□ -1.57
HTTP42858 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.27□□□□□ -1.57
HTTP42858 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.27□□□□□ -1.57
HTTP42858 AC244100.1-202ENST00000621554 382 ntBASIC5.27□□□□□ -1.57
HTTP42858 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HTTP42858 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.27□□□□□ -1.57
HTTP42858 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
HTTP42858 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HTTP42858 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
HTTP42858 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC5.27□□□□□ -1.57
HTTP42858 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
HTTP42858 PIEZO2-201ENST00000302079 9356 ntTSL 5 BASIC5.27□□□□□ -1.57
HTTP42858 PPFIA2-216ENST00000549396 5363 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
HTTP42858 OR7E122P-202ENST00000641144 6171 ntBASIC5.27□□□□□ -1.57
HTTP42858 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HTTP42858 AC079804.1-201ENST00000461922 436 ntBASIC5.27□□□□□ -1.57
HTTP42858 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.27□□□□□ -1.57
HTTP42858 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.27□□□□□ -1.57
HTTP42858 AC073137.1-201ENST00000605636 634 ntBASIC5.27□□□□□ -1.57
HTTP42858 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.27□□□□□ -1.57
HTTP42858 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HTTP42858 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.27□□□□□ -1.57
HTTP42858 SPATA31D5P-201ENST00000376459 4784 ntBASIC5.26□□□□□ -1.57
HTTP42858 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HTTP42858 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
HTTP42858 CRYBB2P1-203ENST00000415709 538 ntBASIC5.26□□□□□ -1.57
HTTP42858 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.26□□□□□ -1.57
HTTP42858 AC017019.1-201ENST00000426129 261 ntBASIC5.26□□□□□ -1.57
HTTP42858 YME1L1P1-201ENST00000429435 297 ntBASIC5.26□□□□□ -1.57
HTTP42858 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.26□□□□□ -1.57
HTTP42858 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HTTP42858 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.26□□□□□ -1.57
HTTP42858 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC5.26□□□□□ -1.57
HTTP42858 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HTTP42858 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
HTTP42858 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.26□□□□□ -1.57
HTTP42858 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HTTP42858 NAIP-208ENST00000517649 6124 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HTTP42858 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HTTP42858 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
HTTP42858 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.26□□□□□ -1.57
HTTP42858 LINC00993-201ENST00000420453 540 ntBASIC5.26□□□□□ -1.57
HTTP42858 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.26□□□□□ -1.57
HTTP42858 AL500522.2-201ENST00000448562 343 ntBASIC5.26□□□□□ -1.57
HTTP42858 AC105137.1-201ENST00000484355 562 ntBASIC5.26□□□□□ -1.57
HTTP42858 IGBP1P4-201ENST00000503202 879 ntBASIC5.26□□□□□ -1.57
HTTP42858 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HTTP42858 AC084824.2-201ENST00000548906 345 ntBASIC5.26□□□□□ -1.57
HTTP42858 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.26□□□□□ -1.57
HTTP42858 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.26□□□□□ -1.57
HTTP42858 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HTTP42858 TTC41P-205ENST00000551270 3963 ntBASIC5.26□□□□□ -1.57
HTTP42858 AC009643.2-201ENST00000603543 1448 ntBASIC5.26□□□□□ -1.57
HTTP42858 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HTTP42858 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.26□□□□□ -1.57
HTTP42858 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HTTP42858 AC140479.3-201ENST00000418944 1126 ntBASIC5.26□□□□□ -1.57
HTTP42858 COX6CP15-201ENST00000426313 211 ntBASIC5.26□□□□□ -1.57
HTTP42858 H3F3BP1-201ENST00000440551 403 ntBASIC5.26□□□□□ -1.57
HTTP42858 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HTTP42858 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.26□□□□□ -1.57
HTTP42858 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.26□□□□□ -1.57
HTTP42858 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.26□□□□□ -1.57
HTTP42858 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HTTP42858 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.25□□□□□ -1.57
HTTP42858 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HTTP42858 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
HTTP42858 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HTTP42858 CAST-202ENST00000325674 3356 ntTSL 5 BASIC5.25□□□□□ -1.57
HTTP42858 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms