Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.32□□□□□ -1.56
HNF4AP41235 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.32□□□□□ -1.56
HNF4AP41235 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
HNF4AP41235 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.32□□□□□ -1.56
HNF4AP41235 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.32□□□□□ -1.56
HNF4AP41235 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
HNF4AP41235 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HNF4AP41235 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HNF4AP41235 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
HNF4AP41235 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.32□□□□□ -1.56
HNF4AP41235 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HNF4AP41235 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.31□□□□□ -1.56
HNF4AP41235 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.31□□□□□ -1.56
HNF4AP41235 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.31□□□□□ -1.56
HNF4AP41235 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HNF4AP41235 AP000756.2-201ENST00000624168 2567 ntBASIC5.31□□□□□ -1.56
HNF4AP41235 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.31□□□□□ -1.56
HNF4AP41235 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
HNF4AP41235 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
HNF4AP41235 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HNF4AP41235 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.31□□□□□ -1.56
HNF4AP41235 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HNF4AP41235 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.31□□□□□ -1.56
HNF4AP41235 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
HNF4AP41235 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
HNF4AP41235 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HNF4AP41235 ZNF733P-202ENST00000444809 1573 ntBASIC5.31□□□□□ -1.56
HNF4AP41235 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
HNF4AP41235 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HNF4AP41235 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.31□□□□□ -1.56
HNF4AP41235 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.31□□□□□ -1.56
HNF4AP41235 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HNF4AP41235 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.31□□□□□ -1.56
HNF4AP41235 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.31□□□□□ -1.56
HNF4AP41235 AC104843.2-201ENST00000427666 297 ntBASIC5.31□□□□□ -1.56
HNF4AP41235 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.31□□□□□ -1.56
HNF4AP41235 OR6D1P-201ENST00000436165 939 ntBASIC5.31□□□□□ -1.56
HNF4AP41235 AC092106.1-201ENST00000444291 373 ntBASIC5.31□□□□□ -1.56
HNF4AP41235 AL157827.1-201ENST00000447622 132 ntBASIC5.31□□□□□ -1.56
HNF4AP41235 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.31□□□□□ -1.56
HNF4AP41235 AL450023.1-201ENST00000450868 751 ntBASIC5.31□□□□□ -1.56
HNF4AP41235 RN7SL515P-201ENST00000463999 297 ntBASIC5.31□□□□□ -1.56
HNF4AP41235 RPL21P6-201ENST00000479171 504 ntBASIC5.31□□□□□ -1.56
HNF4AP41235 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HNF4AP41235 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.31□□□□□ -1.56
HNF4AP41235 FABP5P6-201ENST00000510588 409 ntBASIC5.31□□□□□ -1.56
HNF4AP41235 AC108471.1-201ENST00000513977 287 ntBASIC5.31□□□□□ -1.56
HNF4AP41235 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.31□□□□□ -1.56
HNF4AP41235 RN7SKP99-201ENST00000517028 307 ntBASIC5.31□□□□□ -1.56
HNF4AP41235 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.31□□□□□ -1.56
HNF4AP41235 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.31□□□□□ -1.56
HNF4AP41235 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.31□□□□□ -1.56
HNF4AP41235 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.31□□□□□ -1.56
HNF4AP41235 AP005403.1-201ENST00000579720 229 ntBASIC5.31□□□□□ -1.56
HNF4AP41235 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.31□□□□□ -1.56
HNF4AP41235 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.31□□□□□ -1.56
HNF4AP41235 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.31□□□□□ -1.56
HNF4AP41235 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.31□□□□□ -1.56
HNF4AP41235 AC010632.3-201ENST00000611377 369 ntBASIC5.31□□□□□ -1.56
HNF4AP41235 AC006213.5-201ENST00000619673 288 ntBASIC5.31□□□□□ -1.56
HNF4AP41235 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.31□□□□□ -1.56
HNF4AP41235 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.31□□□□□ -1.56
HNF4AP41235 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HNF4AP41235 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.31□□□□□ -1.56
HNF4AP41235 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HNF4AP41235 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
HNF4AP41235 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HNF4AP41235 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HNF4AP41235 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HNF4AP41235 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HNF4AP41235 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.3□□□□□ -1.56
HNF4AP41235 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HNF4AP41235 AC007996.1-201ENST00000620414 2821 ntBASIC5.3□□□□□ -1.56
HNF4AP41235 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HNF4AP41235 AC090017.1-201ENST00000548612 1779 ntBASIC5.3□□□□□ -1.56
HNF4AP41235 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HNF4AP41235 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
HNF4AP41235 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.3□□□□□ -1.56
HNF4AP41235 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HNF4AP41235 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.3□□□□□ -1.56
HNF4AP41235 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.3□□□□□ -1.56
HNF4AP41235 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HNF4AP41235 RN7SKP28-201ENST00000364770 305 ntBASIC5.3□□□□□ -1.56
HNF4AP41235 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HNF4AP41235 RNA5SP178-201ENST00000410380 128 ntBASIC5.3□□□□□ -1.56
HNF4AP41235 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.3□□□□□ -1.56
HNF4AP41235 BMS1P17-202ENST00000416720 316 ntBASIC5.3□□□□□ -1.56
HNF4AP41235 AL121878.1-201ENST00000418638 859 ntBASIC5.3□□□□□ -1.56
HNF4AP41235 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.3□□□□□ -1.56
HNF4AP41235 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.3□□□□□ -1.56
HNF4AP41235 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.3□□□□□ -1.56
HNF4AP41235 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.3□□□□□ -1.56
HNF4AP41235 AP000797.2-201ENST00000475768 606 ntBASIC5.3□□□□□ -1.56
HNF4AP41235 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.3□□□□□ -1.56
HNF4AP41235 AC074087.1-201ENST00000512059 724 ntBASIC5.3□□□□□ -1.56
HNF4AP41235 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.3□□□□□ -1.56
HNF4AP41235 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.3□□□□□ -1.56
HNF4AP41235 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.3□□□□□ -1.56
HNF4AP41235 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.3□□□□□ -1.56
HNF4AP41235 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms