Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.4□□□□□ -1.55
HOXA9P31269 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
HOXA9P31269 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.4□□□□□ -1.55
HOXA9P31269 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.4□□□□□ -1.55
HOXA9P31269 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HOXA9P31269 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA9P31269 MAPK10-338ENST00000641647 3362 ntBASIC5.39□□□□□ -1.55
HOXA9P31269 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
HOXA9P31269 AC104964.3-201ENST00000606115 2860 ntBASIC5.39□□□□□ -1.55
HOXA9P31269 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXA9P31269 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA9P31269 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
HOXA9P31269 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA9P31269 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXA9P31269 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
HOXA9P31269 AL360270.2-201ENST00000562952 5985 ntBASIC5.39□□□□□ -1.55
HOXA9P31269 AC010132.2-201ENST00000295493 1043 ntBASIC5.39□□□□□ -1.55
HOXA9P31269 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA9P31269 AC013442.1-201ENST00000397347 228 ntBASIC5.39□□□□□ -1.55
HOXA9P31269 RANP7-201ENST00000418085 644 ntBASIC5.39□□□□□ -1.55
HOXA9P31269 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA9P31269 HSPD1P12-201ENST00000429127 1069 ntBASIC5.39□□□□□ -1.55
HOXA9P31269 RPL5P25-201ENST00000441148 775 ntBASIC5.39□□□□□ -1.55
HOXA9P31269 OR7E125P-201ENST00000443450 846 ntBASIC5.39□□□□□ -1.55
HOXA9P31269 AL354714.3-201ENST00000447284 493 ntBASIC5.39□□□□□ -1.55
HOXA9P31269 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXA9P31269 AL513533.1-201ENST00000453728 415 ntBASIC5.39□□□□□ -1.55
HOXA9P31269 RN7SL189P-201ENST00000468631 289 ntBASIC5.39□□□□□ -1.55
HOXA9P31269 AC006463.2-201ENST00000473326 348 ntBASIC5.39□□□□□ -1.55
HOXA9P31269 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA9P31269 AC105420.1-201ENST00000504389 582 ntBASIC5.39□□□□□ -1.55
HOXA9P31269 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.39□□□□□ -1.55
HOXA9P31269 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.39□□□□□ -1.55
HOXA9P31269 BTF3P13-201ENST00000513224 490 ntBASIC5.39□□□□□ -1.55
HOXA9P31269 RNA5SP43-201ENST00000516559 110 ntBASIC5.39□□□□□ -1.55
HOXA9P31269 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.39□□□□□ -1.55
HOXA9P31269 AC008147.3-201ENST00000548666 354 ntBASIC5.39□□□□□ -1.55
HOXA9P31269 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXA9P31269 AC087283.1-201ENST00000604029 1074 ntBASIC5.39□□□□□ -1.55
HOXA9P31269 AL034374.2-201ENST00000605281 548 ntBASIC5.39□□□□□ -1.55
HOXA9P31269 AC007786.3-201ENST00000615154 596 ntBASIC5.39□□□□□ -1.55
HOXA9P31269 uc_338.18-201ENST00000615451 175 ntBASIC5.39□□□□□ -1.55
HOXA9P31269 MIR6133-201ENST00000617057 108 ntBASIC5.39□□□□□ -1.55
HOXA9P31269 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXA9P31269 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA9P31269 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA9P31269 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA9P31269 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA9P31269 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
HOXA9P31269 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXA9P31269 AC132825.1-201ENST00000463573 2247 ntBASIC5.39□□□□□ -1.55
HOXA9P31269 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXA9P31269 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA9P31269 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA9P31269 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
HOXA9P31269 AC006210.2-201ENST00000367074 1545 ntBASIC5.38□□□□□ -1.55
HOXA9P31269 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXA9P31269 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HOXA9P31269 AC016745.2-201ENST00000608834 3443 ntBASIC5.38□□□□□ -1.55
HOXA9P31269 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA9P31269 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA9P31269 RN7SKP113-201ENST00000363891 295 ntBASIC5.38□□□□□ -1.55
HOXA9P31269 SNORA5.1-201ENST00000384275 131 ntBASIC5.38□□□□□ -1.55
HOXA9P31269 MIR589-201ENST00000385238 99 ntBASIC5.38□□□□□ -1.55
HOXA9P31269 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA9P31269 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXA9P31269 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXA9P31269 RPS29P33-201ENST00000456717 146 ntBASIC5.38□□□□□ -1.55
HOXA9P31269 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXA9P31269 RPL7P41-201ENST00000485823 957 ntBASIC5.38□□□□□ -1.55
HOXA9P31269 AC097173.1-201ENST00000505862 819 ntBASIC5.38□□□□□ -1.55
HOXA9P31269 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXA9P31269 BNIP3P1-201ENST00000547295 580 ntBASIC5.38□□□□□ -1.55
HOXA9P31269 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXA9P31269 MIR7853-201ENST00000584820 132 ntBASIC5.38□□□□□ -1.55
HOXA9P31269 AL031320.1-201ENST00000604177 357 ntBASIC5.38□□□□□ -1.55
HOXA9P31269 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXA9P31269 AC003973.3-201ENST00000624863 2822 ntBASIC5.38□□□□□ -1.55
HOXA9P31269 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA9P31269 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA9P31269 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA9P31269 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXA9P31269 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA9P31269 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA9P31269 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HOXA9P31269 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HOXA9P31269 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA9P31269 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
HOXA9P31269 IRF5P1-201ENST00000504852 2164 ntBASIC5.38□□□□□ -1.55
HOXA9P31269 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
HOXA9P31269 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA9P31269 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA9P31269 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXA9P31269 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA9P31269 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXA9P31269 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA9P31269 AP001029.2-203ENST00000589795 4910 ntBASIC5.37□□□□□ -1.55
HOXA9P31269 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
HOXA9P31269 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA9P31269 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms