Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.31□□□□□ -1.56
ABCD3P28288 AC068620.3-201ENST00000602749 560 ntBASIC5.31□□□□□ -1.56
ABCD3P28288 AL133481.2-203ENST00000607558 139 ntBASIC5.31□□□□□ -1.56
ABCD3P28288 AC024933.1-201ENST00000608472 348 ntBASIC5.31□□□□□ -1.56
ABCD3P28288 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ABCD3P28288 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.31□□□□□ -1.56
ABCD3P28288 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.31□□□□□ -1.56
ABCD3P28288 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
ABCD3P28288 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
ABCD3P28288 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ABCD3P28288 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.31□□□□□ -1.56
ABCD3P28288 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
ABCD3P28288 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ABCD3P28288 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ABCD3P28288 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
ABCD3P28288 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.3□□□□□ -1.56
ABCD3P28288 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ABCD3P28288 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.3□□□□□ -1.56
ABCD3P28288 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
ABCD3P28288 BX005019.1-201ENST00000561881 1810 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
ABCD3P28288 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
ABCD3P28288 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
ABCD3P28288 AL159987.1-201ENST00000347911 293 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 RN7SKP292-201ENST00000365522 317 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.3□□□□□ -1.56
ABCD3P28288 AL355615.1-201ENST00000406187 641 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 RN7SKP17-201ENST00000411242 351 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 AC013404.1-201ENST00000413068 249 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.3□□□□□ -1.56
ABCD3P28288 HMGB3P31-201ENST00000413333 595 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.3□□□□□ -1.56
ABCD3P28288 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.3□□□□□ -1.56
ABCD3P28288 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.3□□□□□ -1.56
ABCD3P28288 AC073310.1-201ENST00000423226 1033 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.3□□□□□ -1.56
ABCD3P28288 AC013262.1-201ENST00000426710 252 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 VTI1BP4-201ENST00000427516 527 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 RPS24P8-201ENST00000431490 402 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.3□□□□□ -1.56
ABCD3P28288 FTH1P16-201ENST00000435241 552 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.3□□□□□ -1.56
ABCD3P28288 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.3□□□□□ -1.56
ABCD3P28288 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.3□□□□□ -1.56
ABCD3P28288 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.3□□□□□ -1.56
ABCD3P28288 RPL31P44-201ENST00000447680 377 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.3□□□□□ -1.56
ABCD3P28288 AC243772.1-201ENST00000451620 410 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 ATP5G1P3-201ENST00000463301 410 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 RPS23P6-201ENST00000466136 431 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.3□□□□□ -1.56
ABCD3P28288 RPL23AP12-201ENST00000467573 473 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 RN7SL570P-201ENST00000484405 292 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.3□□□□□ -1.56
ABCD3P28288 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.3□□□□□ -1.56
ABCD3P28288 AC021678.3-201ENST00000517893 476 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 AC010476.1-201ENST00000519111 851 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.3□□□□□ -1.56
ABCD3P28288 AP002812.4-201ENST00000532139 286 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 AC087894.1-201ENST00000538359 518 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
ABCD3P28288 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.3□□□□□ -1.56
ABCD3P28288 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ABCD3P28288 AC008521.2-201ENST00000591021 259 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 AL513327.3-201ENST00000602618 469 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 AC097504.2-201ENST00000608088 454 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ABCD3P28288 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.3□□□□□ -1.56
ABCD3P28288 AC087565.3-203ENST00000641018 837 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
ABCD3P28288 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ABCD3P28288 MRE11P1-201ENST00000464884 2127 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ABCD3P28288 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
ABCD3P28288 VN2R3P-201ENST00000422626 1412 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.3□□□□□ -1.56
ABCD3P28288 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.3□□□□□ -1.56
ABCD3P28288 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
ABCD3P28288 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
ABCD3P28288 AL355488.2-201ENST00000609909 2850 ntBASIC5.3□□□□□ -1.56
ABCD3P28288 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ABCD3P28288 AL359955.1-201ENST00000455242 3275 ntBASIC5.29□□□□□ -1.56
ABCD3P28288 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.29□□□□□ -1.56
ABCD3P28288 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
ABCD3P28288 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.29□□□□□ -1.56
ABCD3P28288 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
ABCD3P28288 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ABCD3P28288 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
ABCD3P28288 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ABCD3P28288 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
ABCD3P28288 AL132640.2-201ENST00000559968 1698 ntBASIC5.29□□□□□ -1.56
ABCD3P28288 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.29□□□□□ -1.56
ABCD3P28288 RNU1-74P-201ENST00000384108 171 ntBASIC5.29□□□□□ -1.56
ABCD3P28288 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
ABCD3P28288 RPL22P22-201ENST00000395439 379 ntBASIC5.29□□□□□ -1.56
ABCD3P28288 HMGB1P20-201ENST00000402555 677 ntBASIC5.29□□□□□ -1.56
ABCD3P28288 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.29□□□□□ -1.56
ABCD3P28288 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms