Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.65□□□□□ -1.5
CD40P25942 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.65□□□□□ -1.5
CD40P25942 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.65□□□□□ -1.5
CD40P25942 AC005899.7-201ENST00000618199 588 ntBASIC5.65□□□□□ -1.5
CD40P25942 MIR6085-201ENST00000618314 110 ntBASIC5.65□□□□□ -1.5
CD40P25942 AL445670.1-201ENST00000618889 801 ntBASIC5.65□□□□□ -1.5
CD40P25942 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.65□□□□□ -1.5
CD40P25942 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.65□□□□□ -1.5
CD40P25942 AL122023.1-201ENST00000622847 530 ntBASIC5.65□□□□□ -1.5
CD40P25942 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC5.65□□□□□ -1.5
CD40P25942 AL359715.5-201ENST00000623431 443 ntBASIC5.65□□□□□ -1.5
CD40P25942 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.65□□□□□ -1.5
CD40P25942 PCMTD1P7-201ENST00000634506 357 ntBASIC5.65□□□□□ -1.5
CD40P25942 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CD40P25942 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CD40P25942 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CD40P25942 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CD40P25942 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CD40P25942 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.65□□□□□ -1.51
CD40P25942 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CD40P25942 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CD40P25942 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CD40P25942 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CD40P25942 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CD40P25942 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CD40P25942 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CD40P25942 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CD40P25942 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CD40P25942 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CD40P25942 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CD40P25942 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CD40P25942 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CD40P25942 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC5.64□□□□□ -1.51
CD40P25942 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.64□□□□□ -1.51
CD40P25942 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CD40P25942 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CD40P25942 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.64□□□□□ -1.51
CD40P25942 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC5.64□□□□□ -1.51
CD40P25942 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CD40P25942 AL355488.2-201ENST00000609909 2850 ntBASIC5.64□□□□□ -1.51
CD40P25942 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.64□□□□□ -1.51
CD40P25942 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.64□□□□□ -1.51
CD40P25942 AL022393.1-201ENST00000625142 1677 ntBASIC5.64□□□□□ -1.51
CD40P25942 CASC19-228ENST00000641414 1684 ntBASIC5.64□□□□□ -1.51
CD40P25942 ASNSP1-204ENST00000641977 1664 ntBASIC5.64□□□□□ -1.51
CD40P25942 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CD40P25942 RNU6-1066P-201ENST00000363573 105 ntBASIC5.64□□□□□ -1.51
CD40P25942 RNA5SP232-201ENST00000364144 119 ntBASIC5.64□□□□□ -1.51
CD40P25942 RNA5SP77-201ENST00000365394 120 ntBASIC5.64□□□□□ -1.51
CD40P25942 OR5H15-201ENST00000383696 930 ntBASIC5.64□□□□□ -1.51
CD40P25942 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CD40P25942 AL133264.1-201ENST00000407157 562 ntBASIC5.64□□□□□ -1.51
CD40P25942 Y_RNA.619-201ENST00000410951 90 ntBASIC5.64□□□□□ -1.51
CD40P25942 AL390774.1-201ENST00000411924 246 ntBASIC5.64□□□□□ -1.51
CD40P25942 RPS15AP38-201ENST00000413110 372 ntBASIC5.64□□□□□ -1.51
CD40P25942 MTCO3P41-201ENST00000414801 328 ntBASIC5.64□□□□□ -1.51
CD40P25942 OR6C64P-201ENST00000419708 825 ntBASIC5.64□□□□□ -1.51
CD40P25942 AC006366.1-201ENST00000422002 759 ntBASIC5.64□□□□□ -1.51
CD40P25942 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.64□□□□□ -1.51
CD40P25942 SKP1P3-201ENST00000429280 487 ntBASIC5.64□□□□□ -1.51
CD40P25942 RPL31P54-201ENST00000429803 370 ntBASIC5.64□□□□□ -1.51
CD40P25942 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.64□□□□□ -1.51
CD40P25942 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CD40P25942 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.64□□□□□ -1.51
CD40P25942 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC5.64□□□□□ -1.51
CD40P25942 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.64□□□□□ -1.51
CD40P25942 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC5.64□□□□□ -1.51
CD40P25942 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CD40P25942 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.64□□□□□ -1.51
CD40P25942 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.64□□□□□ -1.51
CD40P25942 AC072039.1-201ENST00000477611 581 ntBASIC5.64□□□□□ -1.51
CD40P25942 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CD40P25942 HMGN1P16-201ENST00000508308 283 ntBASIC5.64□□□□□ -1.51
CD40P25942 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
CD40P25942 AC083906.1-201ENST00000509298 406 ntBASIC5.64□□□□□ -1.51
CD40P25942 AC093281.2-201ENST00000510153 597 ntBASIC5.64□□□□□ -1.51
CD40P25942 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC5.64□□□□□ -1.51
CD40P25942 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.64□□□□□ -1.51
CD40P25942 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.64□□□□□ -1.51
CD40P25942 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.64□□□□□ -1.51
CD40P25942 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.64□□□□□ -1.51
CD40P25942 AC106038.2-201ENST00000520706 568 ntBASIC5.64□□□□□ -1.51
CD40P25942 AC092709.1-201ENST00000521355 1045 ntBASIC5.64□□□□□ -1.51
CD40P25942 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.64□□□□□ -1.51
CD40P25942 AP001189.2-201ENST00000527320 189 ntBASIC5.64□□□□□ -1.51
CD40P25942 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.64□□□□□ -1.51
CD40P25942 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CD40P25942 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.64□□□□□ -1.51
CD40P25942 AC004217.3-201ENST00000551552 878 ntBASIC5.64□□□□□ -1.51
CD40P25942 AC107958.1-201ENST00000556576 290 ntBASIC5.64□□□□□ -1.51
CD40P25942 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.64□□□□□ -1.51
CD40P25942 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.64□□□□□ -1.51
CD40P25942 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CD40P25942 ROCK1P1-201ENST00000573767 549 ntBASIC5.64□□□□□ -1.51
CD40P25942 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.64□□□□□ -1.51
CD40P25942 MIR3154-201ENST00000577829 84 ntBASIC5.64□□□□□ -1.51
CD40P25942 AP001094.1-201ENST00000579805 193 ntBASIC5.64□□□□□ -1.51
CD40P25942 AC026898.1-201ENST00000586404 571 ntBASIC5.64□□□□□ -1.51
CD40P25942 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.64□□□□□ -1.51
CD40P25942 U73023.1-201ENST00000603134 700 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms