Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.52□□□□□ -1.69
USF1P22415 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.52□□□□□ -1.69
USF1P22415 AP000859.1-201ENST00000525536 307 ntBASIC4.52□□□□□ -1.69
USF1P22415 OR5AM1P-201ENST00000532136 1032 ntBASIC4.52□□□□□ -1.69
USF1P22415 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.52□□□□□ -1.69
USF1P22415 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.52□□□□□ -1.69
USF1P22415 OR11J2P-201ENST00000555298 907 ntBASIC4.52□□□□□ -1.69
USF1P22415 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
USF1P22415 AP005403.1-201ENST00000579720 229 ntBASIC4.52□□□□□ -1.69
USF1P22415 MIR4436B2-201ENST00000581415 91 ntBASIC4.52□□□□□ -1.69
USF1P22415 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.52□□□□□ -1.69
USF1P22415 MIR4436B1-201ENST00000583272 91 ntBASIC4.52□□□□□ -1.69
USF1P22415 AC104785.1-201ENST00000603220 588 ntBASIC4.52□□□□□ -1.69
USF1P22415 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.52□□□□□ -1.69
USF1P22415 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
USF1P22415 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USF1P22415 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.52□□□□□ -1.69
USF1P22415 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USF1P22415 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USF1P22415 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
USF1P22415 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USF1P22415 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USF1P22415 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
USF1P22415 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
USF1P22415 AC079097.1-201ENST00000512187 1399 ntBASIC4.52□□□□□ -1.69
USF1P22415 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
USF1P22415 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
USF1P22415 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.51□□□□□ -1.69
USF1P22415 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
USF1P22415 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
USF1P22415 SNORA16A-201ENST00000384342 137 ntBASIC4.51□□□□□ -1.69
USF1P22415 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
USF1P22415 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
USF1P22415 HSPA8P15-201ENST00000401676 786 ntBASIC4.51□□□□□ -1.69
USF1P22415 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.51□□□□□ -1.69
USF1P22415 Y_RNA.625-201ENST00000411256 107 ntBASIC4.51□□□□□ -1.69
USF1P22415 AC211486.3-201ENST00000412694 621 ntBASIC4.51□□□□□ -1.69
USF1P22415 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.51□□□□□ -1.69
USF1P22415 AL133482.1-201ENST00000415988 498 ntBASIC4.51□□□□□ -1.69
USF1P22415 PTP4A1P1-201ENST00000420539 515 ntBASIC4.51□□□□□ -1.69
USF1P22415 SETP10-201ENST00000424368 814 ntBASIC4.51□□□□□ -1.69
USF1P22415 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.51□□□□□ -1.69
USF1P22415 AC092647.3-201ENST00000443044 633 ntBASIC4.51□□□□□ -1.69
USF1P22415 GAPDHP25-201ENST00000447061 1001 ntBASIC4.51□□□□□ -1.69
USF1P22415 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.51□□□□□ -1.69
USF1P22415 RPL7P40-201ENST00000481703 745 ntBASIC4.51□□□□□ -1.69
USF1P22415 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.51□□□□□ -1.69
USF1P22415 AC015864.1-201ENST00000496512 544 ntBASIC4.51□□□□□ -1.69
USF1P22415 AL671862.1-201ENST00000515851 349 ntBASIC4.51□□□□□ -1.69
USF1P22415 RN7SKP253-201ENST00000516424 309 ntBASIC4.51□□□□□ -1.69
USF1P22415 AC013701.1-201ENST00000522657 465 ntBASIC4.51□□□□□ -1.69
USF1P22415 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.51□□□□□ -1.69
USF1P22415 AP001922.4-201ENST00000526967 290 ntBASIC4.51□□□□□ -1.69
USF1P22415 AC025423.2-201ENST00000537570 439 ntBASIC4.51□□□□□ -1.69
USF1P22415 AC092490.3-201ENST00000545370 572 ntBASIC4.51□□□□□ -1.69
USF1P22415 AP005262.1-201ENST00000582646 997 ntBASIC4.51□□□□□ -1.69
USF1P22415 MIR7853-201ENST00000584820 132 ntBASIC4.51□□□□□ -1.69
USF1P22415 VN1R81P-201ENST00000602085 372 ntBASIC4.51□□□□□ -1.69
USF1P22415 AL354950.1-201ENST00000614150 568 ntBASIC4.51□□□□□ -1.69
USF1P22415 AC100827.5-201ENST00000615883 426 ntBASIC4.51□□□□□ -1.69
USF1P22415 AC015660.5-201ENST00000623238 564 ntBASIC4.51□□□□□ -1.69
USF1P22415 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.51□□□□□ -1.69
USF1P22415 LINC01739-205ENST00000641890 573 ntBASIC4.51□□□□□ -1.69
USF1P22415 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
USF1P22415 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.51□□□□□ -1.69
USF1P22415 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
USF1P22415 CASC19-281ENST00000642118 1554 ntBASIC4.51□□□□□ -1.69
USF1P22415 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
USF1P22415 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
USF1P22415 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
USF1P22415 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
USF1P22415 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
USF1P22415 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.51□□□□□ -1.69
USF1P22415 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
USF1P22415 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
USF1P22415 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.5□□□□□ -1.69
USF1P22415 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.5□□□□□ -1.69
USF1P22415 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.5□□□□□ -1.69
USF1P22415 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
USF1P22415 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
USF1P22415 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
USF1P22415 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
USF1P22415 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.5□□□□□ -1.69
USF1P22415 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.5□□□□□ -1.69
USF1P22415 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
USF1P22415 CHMP1B2P-201ENST00000399581 597 ntBASIC4.5□□□□□ -1.69
USF1P22415 RN7SKP126-201ENST00000411143 300 ntBASIC4.5□□□□□ -1.69
USF1P22415 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.5□□□□□ -1.69
USF1P22415 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.5□□□□□ -1.69
USF1P22415 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.5□□□□□ -1.69
USF1P22415 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.5□□□□□ -1.69
USF1P22415 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.5□□□□□ -1.69
USF1P22415 ARAFP2-201ENST00000440565 559 ntBASIC4.5□□□□□ -1.69
USF1P22415 AC073465.2-201ENST00000440938 498 ntBASIC4.5□□□□□ -1.69
USF1P22415 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.5□□□□□ -1.69
USF1P22415 RPL7P6-201ENST00000480903 738 ntBASIC4.5□□□□□ -1.69
USF1P22415 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.5□□□□□ -1.69
USF1P22415 AC023424.1-201ENST00000496058 459 ntBASIC4.5□□□□□ -1.69
USF1P22415 RPS4XP20-201ENST00000505751 772 ntBASIC4.5□□□□□ -1.69
USF1P22415 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms