Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 OR56A4-201ENST00000330728 1209 ntBASIC7.26□□□□□ -1.25
LIG1P18858 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LIG1P18858 HSPD1P16-201ENST00000402302 394 ntBASIC7.26□□□□□ -1.25
LIG1P18858 RN7SKP146-201ENST00000410242 334 ntBASIC7.26□□□□□ -1.25
LIG1P18858 AL663109.1-201ENST00000411498 844 ntBASIC7.26□□□□□ -1.25
LIG1P18858 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC7.26□□□□□ -1.25
LIG1P18858 C1DP1-201ENST00000426049 402 ntBASIC7.26□□□□□ -1.25
LIG1P18858 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.26□□□□□ -1.25
LIG1P18858 MRPS10P2-201ENST00000431226 381 ntBASIC7.26□□□□□ -1.25
LIG1P18858 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC7.26□□□□□ -1.25
LIG1P18858 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC7.26□□□□□ -1.25
LIG1P18858 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC7.26□□□□□ -1.25
LIG1P18858 AC092641.1-201ENST00000440229 772 ntBASIC7.26□□□□□ -1.25
LIG1P18858 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC7.26□□□□□ -1.25
LIG1P18858 AL445991.1-201ENST00000450381 475 ntBASIC7.26□□□□□ -1.25
LIG1P18858 CCNJP1-201ENST00000450600 1149 ntBASIC7.26□□□□□ -1.25
LIG1P18858 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC7.26□□□□□ -1.25
LIG1P18858 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC7.26□□□□□ -1.25
LIG1P18858 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.26□□□□□ -1.25
LIG1P18858 RN7SL393P-201ENST00000463588 296 ntBASIC7.26□□□□□ -1.25
LIG1P18858 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
LIG1P18858 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
LIG1P18858 RPL29P23-201ENST00000486188 442 ntBASIC7.26□□□□□ -1.25
LIG1P18858 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
LIG1P18858 OR7E157P-201ENST00000494376 911 ntBASIC7.26□□□□□ -1.25
LIG1P18858 AC114324.2-202ENST00000503812 134 ntBASIC7.26□□□□□ -1.25
LIG1P18858 AC093870.1-201ENST00000506837 213 ntBASIC7.26□□□□□ -1.25
LIG1P18858 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
LIG1P18858 CR383658.1-201ENST00000514609 734 ntBASIC7.26□□□□□ -1.25
LIG1P18858 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.26□□□□□ -1.25
LIG1P18858 OR4A6P-201ENST00000534364 970 ntBASIC7.26□□□□□ -1.25
LIG1P18858 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
LIG1P18858 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC7.26□□□□□ -1.25
LIG1P18858 AC008126.1-201ENST00000549019 480 ntBASIC7.26□□□□□ -1.25
LIG1P18858 CCNG2P1-201ENST00000549521 1000 ntBASIC7.26□□□□□ -1.25
LIG1P18858 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC7.26□□□□□ -1.25
LIG1P18858 AC087481.2-201ENST00000565492 330 ntBASIC7.26□□□□□ -1.25
LIG1P18858 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.26□□□□□ -1.25
LIG1P18858 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.26□□□□□ -1.25
LIG1P18858 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC7.26□□□□□ -1.25
LIG1P18858 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.26□□□□□ -1.25
LIG1P18858 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC7.26□□□□□ -1.25
LIG1P18858 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC7.26□□□□□ -1.25
LIG1P18858 VN1R83P-201ENST00000595685 445 ntBASIC7.26□□□□□ -1.25
LIG1P18858 VN1R82P-201ENST00000601481 356 ntBASIC7.26□□□□□ -1.25
LIG1P18858 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC7.26□□□□□ -1.25
LIG1P18858 AF131215.7-201ENST00000602443 707 ntBASIC7.26□□□□□ -1.25
LIG1P18858 AP003973.1-201ENST00000604639 691 ntBASIC7.26□□□□□ -1.25
LIG1P18858 AL021368.3-201ENST00000607119 578 ntBASIC7.26□□□□□ -1.25
LIG1P18858 AC124312.6-202ENST00000623624 418 ntBASIC7.26□□□□□ -1.25
LIG1P18858 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
LIG1P18858 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
LIG1P18858 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
LIG1P18858 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC7.26□□□□□ -1.25
LIG1P18858 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
LIG1P18858 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LIG1P18858 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
LIG1P18858 MTCO1P7-201ENST00000419523 1542 ntBASIC7.26□□□□□ -1.25
LIG1P18858 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LIG1P18858 ANKRD36BP1-202ENST00000604892 1417 ntBASIC7.26□□□□□ -1.25
LIG1P18858 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC7.26□□□□□ -1.25
LIG1P18858 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC7.26□□□□□ -1.25
LIG1P18858 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LIG1P18858 EEF1A1P21-201ENST00000512363 1344 ntBASIC7.26□□□□□ -1.25
LIG1P18858 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC7.26□□□□□ -1.25
LIG1P18858 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
LIG1P18858 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
LIG1P18858 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
LIG1P18858 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
LIG1P18858 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
LIG1P18858 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
LIG1P18858 AL121768.1-201ENST00000613917 2544 ntBASIC7.25□□□□□ -1.25
LIG1P18858 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC7.25□□□□□ -1.25
LIG1P18858 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
LIG1P18858 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LIG1P18858 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LIG1P18858 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
LIG1P18858 RNU5E-4P-201ENST00000364931 120 ntBASIC7.25□□□□□ -1.25
LIG1P18858 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
LIG1P18858 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.25□□□□□ -1.25
LIG1P18858 RNU2-16P-201ENST00000410712 136 ntBASIC7.25□□□□□ -1.25
LIG1P18858 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC7.25□□□□□ -1.25
LIG1P18858 HMGA1P8-201ENST00000414130 321 ntBASIC7.25□□□□□ -1.25
LIG1P18858 RPL7AP51-201ENST00000422016 760 ntBASIC7.25□□□□□ -1.25
LIG1P18858 AL049610.1-201ENST00000423374 372 ntBASIC7.25□□□□□ -1.25
LIG1P18858 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.25□□□□□ -1.25
LIG1P18858 AC012519.1-201ENST00000424588 610 ntBASIC7.25□□□□□ -1.25
LIG1P18858 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.25□□□□□ -1.25
LIG1P18858 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.25□□□□□ -1.25
LIG1P18858 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC7.25□□□□□ -1.25
LIG1P18858 GAPDHP19-201ENST00000431768 1005 ntBASIC7.25□□□□□ -1.25
LIG1P18858 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.25□□□□□ -1.25
LIG1P18858 AC128677.1-201ENST00000436016 442 ntBASIC7.25□□□□□ -1.25
LIG1P18858 BX679664.2-201ENST00000439282 283 ntBASIC7.25□□□□□ -1.25
LIG1P18858 AC007327.1-201ENST00000447461 264 ntBASIC7.25□□□□□ -1.25
LIG1P18858 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC7.25□□□□□ -1.25
LIG1P18858 OR51B8P-201ENST00000449892 769 ntBASIC7.25□□□□□ -1.25
LIG1P18858 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC7.25□□□□□ -1.25
LIG1P18858 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.25□□□□□ -1.25
LIG1P18858 AC068724.1-201ENST00000487100 792 ntBASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms