Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RPS23P7-201ENST00000466210 444 ntBASIC5.62□□□□□ -1.51
COL11A1P12107 AP006289.1-201ENST00000538089 277 ntBASIC5.62□□□□□ -1.51
COL11A1P12107 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.62□□□□□ -1.51
COL11A1P12107 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.62□□□□□ -1.51
COL11A1P12107 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.62□□□□□ -1.51
COL11A1P12107 AL023583.1-201ENST00000607518 1143 ntBASIC5.62□□□□□ -1.51
COL11A1P12107 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL11A1P12107 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL11A1P12107 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL11A1P12107 AC010168.2-201ENST00000562691 5428 ntBASIC5.62□□□□□ -1.51
COL11A1P12107 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL11A1P12107 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
COL11A1P12107 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.62□□□□□ -1.51
COL11A1P12107 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL11A1P12107 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL11A1P12107 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
COL11A1P12107 SMG1P7-201ENST00000565246 2704 ntBASIC5.62□□□□□ -1.51
COL11A1P12107 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL11A1P12107 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
COL11A1P12107 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL11A1P12107 RNA5SP453-201ENST00000362503 119 ntBASIC5.62□□□□□ -1.51
COL11A1P12107 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL11A1P12107 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.62□□□□□ -1.51
COL11A1P12107 AL359265.2-201ENST00000434367 631 ntBASIC5.62□□□□□ -1.51
COL11A1P12107 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.62□□□□□ -1.51
COL11A1P12107 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.62□□□□□ -1.51
COL11A1P12107 AC068587.1-201ENST00000483613 781 ntBASIC5.62□□□□□ -1.51
COL11A1P12107 RN7SL244P-201ENST00000493405 297 ntBASIC5.62□□□□□ -1.51
COL11A1P12107 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.62□□□□□ -1.51
COL11A1P12107 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.62□□□□□ -1.51
COL11A1P12107 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.62□□□□□ -1.51
COL11A1P12107 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.62□□□□□ -1.51
COL11A1P12107 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.62□□□□□ -1.51
COL11A1P12107 AC073869.10-201ENST00000642016 354 ntBASIC5.62□□□□□ -1.51
COL11A1P12107 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL11A1P12107 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL11A1P12107 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.62□□□□□ -1.51
COL11A1P12107 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.62□□□□□ -1.51
COL11A1P12107 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
COL11A1P12107 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
COL11A1P12107 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
COL11A1P12107 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL11A1P12107 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL11A1P12107 AL669831.5-218ENST00000591702 1873 ntBASIC5.62□□□□□ -1.51
COL11A1P12107 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL11A1P12107 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
COL11A1P12107 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL11A1P12107 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
COL11A1P12107 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.61□□□□□ -1.51
COL11A1P12107 AL137100.1-201ENST00000556703 1620 ntBASIC5.61□□□□□ -1.51
COL11A1P12107 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL11A1P12107 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
COL11A1P12107 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL11A1P12107 Z97832.1-201ENST00000402490 328 ntBASIC5.61□□□□□ -1.51
COL11A1P12107 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.61□□□□□ -1.51
COL11A1P12107 AC068287.1-201ENST00000430283 295 ntBASIC5.61□□□□□ -1.51
COL11A1P12107 AC009238.2-201ENST00000431026 355 ntBASIC5.61□□□□□ -1.51
COL11A1P12107 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.61□□□□□ -1.51
COL11A1P12107 OR1H1P-201ENST00000448731 937 ntBASIC5.61□□□□□ -1.51
COL11A1P12107 ABCC13-202ENST00000463099 3842 ntBASIC5.61□□□□□ -1.51
COL11A1P12107 AC020898.1-201ENST00000474167 787 ntBASIC5.61□□□□□ -1.51
COL11A1P12107 AC025164.1-201ENST00000496249 478 ntBASIC5.61□□□□□ -1.51
COL11A1P12107 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.61□□□□□ -1.51
COL11A1P12107 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.61□□□□□ -1.51
COL11A1P12107 RN7SL802P-201ENST00000577858 299 ntBASIC5.61□□□□□ -1.51
COL11A1P12107 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
COL11A1P12107 AC083809.1-201ENST00000615051 472 ntBASIC5.61□□□□□ -1.51
COL11A1P12107 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL11A1P12107 AL031123.3-201ENST00000623345 1837 ntBASIC5.61□□□□□ -1.51
COL11A1P12107 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC5.61□□□□□ -1.51
COL11A1P12107 AC009643.2-201ENST00000603543 1448 ntBASIC5.61□□□□□ -1.51
COL11A1P12107 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.61□□□□□ -1.51
COL11A1P12107 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.61□□□□□ -1.51
COL11A1P12107 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.6□□□□□ -1.51
COL11A1P12107 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL11A1P12107 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL11A1P12107 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL11A1P12107 ATP5HP3-201ENST00000396994 486 ntBASIC5.6□□□□□ -1.51
COL11A1P12107 LRRC37BP1-201ENST00000398851 714 ntBASIC5.6□□□□□ -1.51
COL11A1P12107 AL136116.2-201ENST00000404020 785 ntBASIC5.6□□□□□ -1.51
COL11A1P12107 ELOCP19-201ENST00000411919 318 ntBASIC5.6□□□□□ -1.51
COL11A1P12107 RPS27AP7-201ENST00000422792 455 ntBASIC5.6□□□□□ -1.51
COL11A1P12107 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.6□□□□□ -1.51
COL11A1P12107 ARL2BPP10-201ENST00000446487 531 ntBASIC5.6□□□□□ -1.51
COL11A1P12107 AC091180.1-201ENST00000462104 372 ntBASIC5.6□□□□□ -1.51
COL11A1P12107 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
COL11A1P12107 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.6□□□□□ -1.51
COL11A1P12107 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.6□□□□□ -1.51
COL11A1P12107 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL11A1P12107 AC093297.3-201ENST00000607056 2517 ntBASIC5.6□□□□□ -1.51
COL11A1P12107 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL11A1P12107 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL11A1P12107 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
COL11A1P12107 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.6□□□□□ -1.51
COL11A1P12107 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL11A1P12107 AC004817.4-201ENST00000602396 3625 ntBASIC5.6□□□□□ -1.51
COL11A1P12107 AC004158.1-201ENST00000564508 4319 ntBASIC5.6□□□□□ -1.51
COL11A1P12107 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL11A1P12107 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.6□□□□□ -1.51
COL11A1P12107 SOCS5P3-201ENST00000425115 1576 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms