Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
TOP1P11387 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
TOP1P11387 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
TOP1P11387 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TOP1P11387 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TOP1P11387 CASC19-281ENST00000642118 1554 ntBASIC6.03□□□□□ -1.44
TOP1P11387 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.03□□□□□ -1.44
TOP1P11387 RNU4-4P-201ENST00000364588 130 ntBASIC6.03□□□□□ -1.44
TOP1P11387 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
TOP1P11387 RN7SKP114-201ENST00000410327 279 ntBASIC6.03□□□□□ -1.44
TOP1P11387 PSMD10P3-201ENST00000437000 448 ntBASIC6.03□□□□□ -1.44
TOP1P11387 TCEA1P3-201ENST00000443005 880 ntBASIC6.03□□□□□ -1.44
TOP1P11387 AC092647.3-201ENST00000443044 633 ntBASIC6.03□□□□□ -1.44
TOP1P11387 RN7SL610P-201ENST00000463845 291 ntBASIC6.03□□□□□ -1.44
TOP1P11387 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.03□□□□□ -1.44
TOP1P11387 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.03□□□□□ -1.44
TOP1P11387 ENPP7P11-201ENST00000505915 627 ntBASIC6.03□□□□□ -1.44
TOP1P11387 RN7SKP147-201ENST00000517154 244 ntBASIC6.03□□□□□ -1.44
TOP1P11387 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.03□□□□□ -1.44
TOP1P11387 AC008126.1-201ENST00000549019 480 ntBASIC6.03□□□□□ -1.44
TOP1P11387 MTCYBP13-201ENST00000578634 1093 ntBASIC6.03□□□□□ -1.44
TOP1P11387 AC127024.5-201ENST00000580085 462 ntBASIC6.03□□□□□ -1.44
TOP1P11387 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.03□□□□□ -1.44
TOP1P11387 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.03□□□□□ -1.44
TOP1P11387 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.03□□□□□ -1.44
TOP1P11387 OR51C1P-201ENST00000608504 942 ntBASIC6.03□□□□□ -1.44
TOP1P11387 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.03□□□□□ -1.44
TOP1P11387 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
TOP1P11387 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.03□□□□□ -1.44
TOP1P11387 AC138965.3-201ENST00000623875 498 ntBASIC6.03□□□□□ -1.44
TOP1P11387 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
TOP1P11387 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TOP1P11387 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TOP1P11387 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TOP1P11387 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TOP1P11387 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.03□□□□□ -1.44
TOP1P11387 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TOP1P11387 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TOP1P11387 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
TOP1P11387 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.02□□□□□ -1.45
TOP1P11387 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TOP1P11387 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TOP1P11387 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
TOP1P11387 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
TOP1P11387 AC092111.2-201ENST00000611627 1414 ntBASIC6.02□□□□□ -1.45
TOP1P11387 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TOP1P11387 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
TOP1P11387 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TOP1P11387 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.02□□□□□ -1.45
TOP1P11387 MTND6P5-201ENST00000448266 512 ntBASIC6.02□□□□□ -1.45
TOP1P11387 SEPT7P3-201ENST00000455017 621 ntBASIC6.02□□□□□ -1.45
TOP1P11387 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.02□□□□□ -1.45
TOP1P11387 RN7SL97P-201ENST00000486780 299 ntBASIC6.02□□□□□ -1.45
TOP1P11387 COX6B1P2-201ENST00000489624 230 ntBASIC6.02□□□□□ -1.45
TOP1P11387 AC097173.1-201ENST00000505862 819 ntBASIC6.02□□□□□ -1.45
TOP1P11387 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.02□□□□□ -1.45
TOP1P11387 RN7SKP260-201ENST00000516907 149 ntBASIC6.02□□□□□ -1.45
TOP1P11387 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
TOP1P11387 PRPF19P1-201ENST00000584766 898 ntBASIC6.02□□□□□ -1.45
TOP1P11387 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.02□□□□□ -1.45
TOP1P11387 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.02□□□□□ -1.45
TOP1P11387 AP005432.2-201ENST00000608162 586 ntBASIC6.02□□□□□ -1.45
TOP1P11387 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.02□□□□□ -1.45
TOP1P11387 AC093799.2-201ENST00000610062 578 ntBASIC6.02□□□□□ -1.45
TOP1P11387 AC090510.2-201ENST00000617465 629 ntBASIC6.02□□□□□ -1.45
TOP1P11387 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.02□□□□□ -1.45
TOP1P11387 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
TOP1P11387 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TOP1P11387 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.02□□□□□ -1.45
TOP1P11387 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TOP1P11387 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TOP1P11387 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
TOP1P11387 NXF4-202ENST00000416098 1465 ntBASIC6.02□□□□□ -1.45
TOP1P11387 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
TOP1P11387 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.01□□□□□ -1.45
TOP1P11387 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TOP1P11387 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
TOP1P11387 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.01□□□□□ -1.45
TOP1P11387 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
TOP1P11387 RNA5SP223-201ENST00000365174 120 ntBASIC6.01□□□□□ -1.45
TOP1P11387 AC007618.1-201ENST00000366455 732 ntBASIC6.01□□□□□ -1.45
TOP1P11387 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
TOP1P11387 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.01□□□□□ -1.45
TOP1P11387 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.01□□□□□ -1.45
TOP1P11387 NPM1P22-201ENST00000427761 952 ntBASIC6.01□□□□□ -1.45
TOP1P11387 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.01□□□□□ -1.45
TOP1P11387 PRPF38AP1-201ENST00000451976 933 ntBASIC6.01□□□□□ -1.45
TOP1P11387 AC020779.1-201ENST00000478757 796 ntBASIC6.01□□□□□ -1.45
TOP1P11387 RN7SL826P-201ENST00000479724 288 ntBASIC6.01□□□□□ -1.45
TOP1P11387 HMGN2P25-201ENST00000486956 268 ntBASIC6.01□□□□□ -1.45
TOP1P11387 MYL12BP2-201ENST00000503948 512 ntBASIC6.01□□□□□ -1.45
TOP1P11387 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.01□□□□□ -1.45
TOP1P11387 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.01□□□□□ -1.45
TOP1P11387 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.01□□□□□ -1.45
TOP1P11387 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.01□□□□□ -1.45
TOP1P11387 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.01□□□□□ -1.45
TOP1P11387 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.01□□□□□ -1.45
TOP1P11387 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TOP1P11387 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
TOP1P11387 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms