Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TPM1P09493 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TPM1P09493 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.6□□□□□ -1.51
TPM1P09493 OR4K12P-201ENST00000406538 961 ntBASIC5.6□□□□□ -1.51
TPM1P09493 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.6□□□□□ -1.51
TPM1P09493 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.6□□□□□ -1.51
TPM1P09493 NPM1P48-201ENST00000436002 853 ntBASIC5.6□□□□□ -1.51
TPM1P09493 AC002504.1-201ENST00000438281 691 ntBASIC5.6□□□□□ -1.51
TPM1P09493 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TPM1P09493 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TPM1P09493 AC019084.1-201ENST00000457337 432 ntBASIC5.6□□□□□ -1.51
TPM1P09493 AL117692.1-201ENST00000494283 713 ntBASIC5.6□□□□□ -1.51
TPM1P09493 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.6□□□□□ -1.51
TPM1P09493 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TPM1P09493 AC027308.1-201ENST00000517993 110 ntBASIC5.6□□□□□ -1.51
TPM1P09493 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.6□□□□□ -1.51
TPM1P09493 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.6□□□□□ -1.51
TPM1P09493 EIF4A2P5-201ENST00000529914 499 ntBASIC5.6□□□□□ -1.51
TPM1P09493 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.6□□□□□ -1.51
TPM1P09493 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.6□□□□□ -1.51
TPM1P09493 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.6□□□□□ -1.51
TPM1P09493 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.6□□□□□ -1.51
TPM1P09493 AC010547.6-201ENST00000571789 193 ntBASIC5.6□□□□□ -1.51
TPM1P09493 RBM22P1-201ENST00000578589 1214 ntBASIC5.6□□□□□ -1.51
TPM1P09493 AL096712.1-201ENST00000614561 159 ntBASIC5.6□□□□□ -1.51
TPM1P09493 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.6□□□□□ -1.51
TPM1P09493 AC006840.1-201ENST00000623069 542 ntBASIC5.6□□□□□ -1.51
TPM1P09493 AL596275.2-207ENST00000641188 675 ntBASIC5.6□□□□□ -1.51
TPM1P09493 AL596275.2-204ENST00000641628 552 ntBASIC5.6□□□□□ -1.51
TPM1P09493 AL596275.2-206ENST00000641957 626 ntBASIC5.6□□□□□ -1.51
TPM1P09493 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
TPM1P09493 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.6□□□□□ -1.51
TPM1P09493 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
TPM1P09493 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TPM1P09493 AC112255.1-201ENST00000624070 2493 ntBASIC5.59□□□□□ -1.51
TPM1P09493 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TPM1P09493 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.59□□□□□ -1.51
TPM1P09493 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.59□□□□□ -1.51
TPM1P09493 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TPM1P09493 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
TPM1P09493 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
TPM1P09493 RN7SKP113-201ENST00000363891 295 ntBASIC5.59□□□□□ -1.51
TPM1P09493 GAPDHP15-201ENST00000398586 975 ntBASIC5.59□□□□□ -1.51
TPM1P09493 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.59□□□□□ -1.51
TPM1P09493 AC104843.2-201ENST00000427666 297 ntBASIC5.59□□□□□ -1.51
TPM1P09493 RPS26P4-201ENST00000431743 355 ntBASIC5.59□□□□□ -1.51
TPM1P09493 AL356981.1-201ENST00000454879 684 ntBASIC5.59□□□□□ -1.51
TPM1P09493 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
TPM1P09493 AC098583.1-201ENST00000480875 255 ntBASIC5.59□□□□□ -1.51
TPM1P09493 AC092349.1-201ENST00000504903 310 ntBASIC5.59□□□□□ -1.51
TPM1P09493 RPL23AP53-201ENST00000521854 457 ntBASIC5.59□□□□□ -1.51
TPM1P09493 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.59□□□□□ -1.51
TPM1P09493 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.59□□□□□ -1.51
TPM1P09493 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.59□□□□□ -1.51
TPM1P09493 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.59□□□□□ -1.51
TPM1P09493 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.59□□□□□ -1.51
TPM1P09493 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.59□□□□□ -1.51
TPM1P09493 AC105036.1-201ENST00000566222 271 ntBASIC5.59□□□□□ -1.51
TPM1P09493 MIR4505-201ENST00000582238 73 ntBASIC5.59□□□□□ -1.51
TPM1P09493 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
TPM1P09493 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.59□□□□□ -1.51
TPM1P09493 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TPM1P09493 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
TPM1P09493 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
TPM1P09493 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.52
TPM1P09493 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
TPM1P09493 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TPM1P09493 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TPM1P09493 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TPM1P09493 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TPM1P09493 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TPM1P09493 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TPM1P09493 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TPM1P09493 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.58□□□□□ -1.52
TPM1P09493 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.58□□□□□ -1.52
TPM1P09493 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TPM1P09493 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.58□□□□□ -1.52
TPM1P09493 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.58□□□□□ -1.52
TPM1P09493 OR9N1P-201ENST00000491296 333 ntBASIC5.58□□□□□ -1.52
TPM1P09493 RN7SL441P-201ENST00000492388 296 ntBASIC5.58□□□□□ -1.52
TPM1P09493 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.58□□□□□ -1.52
TPM1P09493 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.58□□□□□ -1.52
TPM1P09493 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.58□□□□□ -1.52
TPM1P09493 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.58□□□□□ -1.52
TPM1P09493 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.58□□□□□ -1.52
TPM1P09493 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.58□□□□□ -1.52
TPM1P09493 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.58□□□□□ -1.52
TPM1P09493 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
TPM1P09493 AP002373.2-201ENST00000541631 1060 ntBASIC5.58□□□□□ -1.52
TPM1P09493 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.58□□□□□ -1.52
TPM1P09493 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.58□□□□□ -1.52
TPM1P09493 WBP1LP8-201ENST00000617401 327 ntBASIC5.58□□□□□ -1.52
TPM1P09493 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.58□□□□□ -1.52
TPM1P09493 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.58□□□□□ -1.52
TPM1P09493 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.58□□□□□ -1.52
TPM1P09493 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.58□□□□□ -1.52
TPM1P09493 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TPM1P09493 DDX18P4-201ENST00000511690 1966 ntBASIC5.58□□□□□ -1.52
TPM1P09493 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TPM1P09493 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms