Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL5A2P05997 KCTD10P1-201ENST00000434203 625 ntBASIC6.52□□□□□ -1.37
COL5A2P05997 NPM1P33-201ENST00000438918 872 ntBASIC6.52□□□□□ -1.37
COL5A2P05997 AC239367.2-201ENST00000447309 705 ntBASIC6.52□□□□□ -1.37
COL5A2P05997 OR2A3P-201ENST00000493774 953 ntBASIC6.52□□□□□ -1.37
COL5A2P05997 AC138701.1-201ENST00000524329 714 ntBASIC6.52□□□□□ -1.37
COL5A2P05997 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.52□□□□□ -1.37
COL5A2P05997 BNIP3P5-201ENST00000562290 498 ntBASIC6.52□□□□□ -1.37
COL5A2P05997 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.52□□□□□ -1.37
COL5A2P05997 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.52□□□□□ -1.37
COL5A2P05997 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC6.52□□□□□ -1.37
COL5A2P05997 AC007497.1-201ENST00000610421 561 ntBASIC6.52□□□□□ -1.37
COL5A2P05997 FAM27B-201ENST00000610601 213 ntBASIC6.52□□□□□ -1.37
COL5A2P05997 AL022401.1-201ENST00000619498 108 ntBASIC6.52□□□□□ -1.37
COL5A2P05997 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.52□□□□□ -1.37
COL5A2P05997 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.52□□□□□ -1.37
COL5A2P05997 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL5A2P05997 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL5A2P05997 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
COL5A2P05997 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.52□□□□□ -1.37
COL5A2P05997 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.52□□□□□ -1.37
COL5A2P05997 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.52□□□□□ -1.37
COL5A2P05997 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL5A2P05997 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC6.51□□□□□ -1.37
COL5A2P05997 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
COL5A2P05997 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.51□□□□□ -1.37
COL5A2P05997 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
COL5A2P05997 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL5A2P05997 OR56B2P-202ENST00000641377 2453 ntBASIC6.51□□□□□ -1.37
COL5A2P05997 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL5A2P05997 LRRC37BP1-201ENST00000398851 714 ntBASIC6.51□□□□□ -1.37
COL5A2P05997 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
COL5A2P05997 AL645608.4-201ENST00000423619 154 ntBASIC6.51□□□□□ -1.37
COL5A2P05997 AC016772.1-201ENST00000444170 1261 ntBASIC6.51□□□□□ -1.37
COL5A2P05997 AL691482.1-201ENST00000453255 87 ntBASIC6.51□□□□□ -1.37
COL5A2P05997 AC109327.1-201ENST00000471666 403 ntBASIC6.51□□□□□ -1.37
COL5A2P05997 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.51□□□□□ -1.37
COL5A2P05997 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC6.51□□□□□ -1.37
COL5A2P05997 AL109766.1-201ENST00000555080 552 ntBASIC6.51□□□□□ -1.37
COL5A2P05997 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.51□□□□□ -1.37
COL5A2P05997 MIR7853-201ENST00000584820 132 ntBASIC6.51□□□□□ -1.37
COL5A2P05997 MIR6716-201ENST00000613413 80 ntBASIC6.51□□□□□ -1.37
COL5A2P05997 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL5A2P05997 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.51□□□□□ -1.37
COL5A2P05997 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL5A2P05997 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL5A2P05997 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL5A2P05997 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL5A2P05997 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL5A2P05997 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.5□□□□□ -1.37
COL5A2P05997 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.5□□□□□ -1.37
COL5A2P05997 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL5A2P05997 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL5A2P05997 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
COL5A2P05997 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.5□□□□□ -1.37
COL5A2P05997 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL5A2P05997 MSL3P1-202ENST00000440028 1468 ntBASIC6.5□□□□□ -1.37
COL5A2P05997 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC6.5□□□□□ -1.37
COL5A2P05997 SNORA57.1-201ENST00000391227 145 ntBASIC6.5□□□□□ -1.37
COL5A2P05997 ATG4AP1-201ENST00000416893 538 ntBASIC6.5□□□□□ -1.37
COL5A2P05997 RPL19P16-201ENST00000433839 588 ntBASIC6.5□□□□□ -1.37
COL5A2P05997 AC104971.1-201ENST00000495117 578 ntBASIC6.5□□□□□ -1.37
COL5A2P05997 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.5□□□□□ -1.37
COL5A2P05997 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.5□□□□□ -1.37
COL5A2P05997 AC021483.2-201ENST00000567415 758 ntBASIC6.5□□□□□ -1.37
COL5A2P05997 RN7SL802P-201ENST00000577858 299 ntBASIC6.5□□□□□ -1.37
COL5A2P05997 AC023575.1-201ENST00000580510 358 ntBASIC6.5□□□□□ -1.37
COL5A2P05997 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC6.5□□□□□ -1.37
COL5A2P05997 AC073091.2-201ENST00000603205 907 ntBASIC6.5□□□□□ -1.37
COL5A2P05997 AC008782.1-201ENST00000603386 430 ntBASIC6.5□□□□□ -1.37
COL5A2P05997 AC005191.1-201ENST00000603950 358 ntBASIC6.5□□□□□ -1.37
COL5A2P05997 MIR6133-201ENST00000617057 108 ntBASIC6.5□□□□□ -1.37
COL5A2P05997 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL5A2P05997 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
COL5A2P05997 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL5A2P05997 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL5A2P05997 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.5□□□□□ -1.37
COL5A2P05997 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.5□□□□□ -1.37
COL5A2P05997 AC068446.1-201ENST00000556425 1549 ntBASIC6.5□□□□□ -1.37
COL5A2P05997 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.5□□□□□ -1.37
COL5A2P05997 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.5□□□□□ -1.37
COL5A2P05997 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL5A2P05997 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.5□□□□□ -1.37
COL5A2P05997 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A2P05997 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A2P05997 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A2P05997 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A2P05997 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.49□□□□□ -1.37
COL5A2P05997 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
COL5A2P05997 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A2P05997 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
COL5A2P05997 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL5A2P05997 RPL7AP49-201ENST00000429522 581 ntBASIC6.49□□□□□ -1.37
COL5A2P05997 AL591438.1-201ENST00000433508 581 ntBASIC6.49□□□□□ -1.37
COL5A2P05997 RPL7AP61-201ENST00000443410 636 ntBASIC6.49□□□□□ -1.37
COL5A2P05997 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC6.49□□□□□ -1.37
COL5A2P05997 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC6.49□□□□□ -1.37
COL5A2P05997 Z95152.1-201ENST00000453556 656 ntBASIC6.49□□□□□ -1.37
COL5A2P05997 BUD31P1-201ENST00000521828 359 ntBASIC6.49□□□□□ -1.37
COL5A2P05997 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms