Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC019235.1-201ENST00000503847 207 ntBASIC6.78□□□□□ -1.32
PDGFAP04085 OR7E99P-201ENST00000505750 922 ntBASIC6.78□□□□□ -1.32
PDGFAP04085 NACAP6-201ENST00000509572 622 ntBASIC6.78□□□□□ -1.32
PDGFAP04085 PGAM4P2-201ENST00000512491 721 ntBASIC6.78□□□□□ -1.32
PDGFAP04085 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PDGFAP04085 RNU6-358P-201ENST00000516564 75 ntBASIC6.78□□□□□ -1.32
PDGFAP04085 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.78□□□□□ -1.32
PDGFAP04085 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC6.78□□□□□ -1.32
PDGFAP04085 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.78□□□□□ -1.32
PDGFAP04085 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC6.78□□□□□ -1.32
PDGFAP04085 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.78□□□□□ -1.32
PDGFAP04085 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PDGFAP04085 AC090616.5-202ENST00000582111 297 ntBASIC6.78□□□□□ -1.32
PDGFAP04085 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.78□□□□□ -1.32
PDGFAP04085 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC6.78□□□□□ -1.32
PDGFAP04085 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.78□□□□□ -1.32
PDGFAP04085 AC008277.2-201ENST00000605196 797 ntBASIC6.78□□□□□ -1.32
PDGFAP04085 AC087045.1-201ENST00000605856 382 ntBASIC6.78□□□□□ -1.32
PDGFAP04085 AC009779.8-202ENST00000607990 932 ntBASIC6.78□□□□□ -1.32
PDGFAP04085 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.78□□□□□ -1.32
PDGFAP04085 AL031777.2-201ENST00000611953 196 ntBASIC6.78□□□□□ -1.32
PDGFAP04085 HOTTIP_2.1-201ENST00000616633 376 ntBASIC6.78□□□□□ -1.32
PDGFAP04085 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.78□□□□□ -1.32
PDGFAP04085 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
PDGFAP04085 AL162377.2-201ENST00000624532 337 ntBASIC6.78□□□□□ -1.32
PDGFAP04085 AL356585.10-201ENST00000641883 123 ntBASIC6.78□□□□□ -1.32
PDGFAP04085 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PDGFAP04085 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
PDGFAP04085 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PDGFAP04085 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PDGFAP04085 MTND5P17-201ENST00000418405 1603 ntBASIC6.78□□□□□ -1.32
PDGFAP04085 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PDGFAP04085 AC137056.2-201ENST00000624055 1958 ntBASIC6.78□□□□□ -1.32
PDGFAP04085 AC138915.4-201ENST00000565549 4147 ntBASIC6.78□□□□□ -1.32
PDGFAP04085 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.78□□□□□ -1.32
PDGFAP04085 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PDGFAP04085 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.78□□□□□ -1.32
PDGFAP04085 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
PDGFAP04085 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
PDGFAP04085 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PDGFAP04085 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC6.78□□□□□ -1.32
PDGFAP04085 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PDGFAP04085 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.78□□□□□ -1.32
PDGFAP04085 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC6.78□□□□□ -1.32
PDGFAP04085 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.32
PDGFAP04085 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PDGFAP04085 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PDGFAP04085 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PDGFAP04085 AC093225.1-201ENST00000506867 1408 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.77□□□□□ -1.33
PDGFAP04085 RARSP1-201ENST00000542842 1418 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.77□□□□□ -1.33
PDGFAP04085 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC6.77□□□□□ -1.33
PDGFAP04085 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
PDGFAP04085 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.77□□□□□ -1.33
PDGFAP04085 CASC19-284ENST00000642142 1868 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 AP000866.6-201ENST00000638898 3579 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PDGFAP04085 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PDGFAP04085 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PDGFAP04085 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
PDGFAP04085 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC6.77□□□□□ -1.33
PDGFAP04085 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.77□□□□□ -1.33
PDGFAP04085 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PDGFAP04085 AC119744.1-201ENST00000454746 1715 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
PDGFAP04085 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PDGFAP04085 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PDGFAP04085 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PDGFAP04085 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PDGFAP04085 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PDGFAP04085 RNU6-115P-201ENST00000364310 107 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 XGY1-201ENST00000381172 446 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 AC104297.1-201ENST00000393779 870 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 CREM-214ENST00000395887 849 ntTSL 5 BASIC6.77□□□□□ -1.33
PDGFAP04085 AL590143.1-201ENST00000405071 138 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 RNU6-272P-201ENST00000411028 104 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 RPS21P8-201ENST00000413365 247 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC6.77□□□□□ -1.33
PDGFAP04085 RPL24P2-201ENST00000421023 475 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 AC069157.1-201ENST00000421749 137 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC6.77□□□□□ -1.33
PDGFAP04085 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC6.77□□□□□ -1.33
PDGFAP04085 ZYG11AP1-201ENST00000430329 837 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.77□□□□□ -1.33
PDGFAP04085 RPL12P49-201ENST00000441100 121 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 RPS4XP4-201ENST00000443195 763 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 KF459542.1-201ENST00000450908 553 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 RBMY2TP-201ENST00000451162 947 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 NDUFA5P7-201ENST00000452914 242 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 SRP68P2-201ENST00000456184 254 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.77□□□□□ -1.33
PDGFAP04085 AC079193.1-201ENST00000460497 588 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 RPL23AP71-201ENST00000470966 469 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 AL355032.1-201ENST00000472981 438 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PDGFAP04085 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC6.77□□□□□ -1.33
PDGFAP04085 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC6.77□□□□□ -1.33
PDGFAP04085 AC009646.1-201ENST00000510455 318 ntBASIC6.77□□□□□ -1.33
PDGFAP04085 KCTD9P2-201ENST00000512203 1013 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms