Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
PDGFBP01127 AL035696.2-201ENST00000407941 709 ntBASIC5.39□□□□□ -1.55
PDGFBP01127 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.39□□□□□ -1.55
PDGFBP01127 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.39□□□□□ -1.55
PDGFBP01127 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.39□□□□□ -1.55
PDGFBP01127 EI24P4-201ENST00000423683 1078 ntBASIC5.39□□□□□ -1.55
PDGFBP01127 GTF2IP2-201ENST00000424290 697 ntBASIC5.39□□□□□ -1.55
PDGFBP01127 VN1R21P-201ENST00000426703 765 ntBASIC5.39□□□□□ -1.55
PDGFBP01127 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.39□□□□□ -1.55
PDGFBP01127 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.39□□□□□ -1.55
PDGFBP01127 RPL34P20-201ENST00000442771 351 ntBASIC5.39□□□□□ -1.55
PDGFBP01127 AC112498.1-201ENST00000444401 332 ntBASIC5.39□□□□□ -1.55
PDGFBP01127 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.39□□□□□ -1.55
PDGFBP01127 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.39□□□□□ -1.55
PDGFBP01127 RAB28P3-201ENST00000448325 597 ntBASIC5.39□□□□□ -1.55
PDGFBP01127 NDUFA5P8-201ENST00000449019 346 ntBASIC5.39□□□□□ -1.55
PDGFBP01127 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.39□□□□□ -1.55
PDGFBP01127 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.39□□□□□ -1.55
PDGFBP01127 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.39□□□□□ -1.55
PDGFBP01127 snoU13.1-201ENST00000459157 104 ntBASIC5.39□□□□□ -1.55
PDGFBP01127 RPL7AP28-201ENST00000464513 571 ntBASIC5.39□□□□□ -1.55
PDGFBP01127 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PDGFBP01127 AC091917.2-201ENST00000505002 744 ntBASIC5.39□□□□□ -1.55
PDGFBP01127 AC093815.1-201ENST00000508637 280 ntBASIC5.39□□□□□ -1.55
PDGFBP01127 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.39□□□□□ -1.55
PDGFBP01127 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.39□□□□□ -1.55
PDGFBP01127 PMS2P3-207ENST00000529061 717 ntBASIC5.39□□□□□ -1.55
PDGFBP01127 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.39□□□□□ -1.55
PDGFBP01127 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.39□□□□□ -1.55
PDGFBP01127 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.39□□□□□ -1.55
PDGFBP01127 AC084033.1-201ENST00000550830 633 ntBASIC5.39□□□□□ -1.55
PDGFBP01127 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.39□□□□□ -1.55
PDGFBP01127 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.39□□□□□ -1.55
PDGFBP01127 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.39□□□□□ -1.55
PDGFBP01127 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.39□□□□□ -1.55
PDGFBP01127 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.39□□□□□ -1.55
PDGFBP01127 OR52H1-202ENST00000641796 1061 ntBASIC5.39□□□□□ -1.55
PDGFBP01127 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.39□□□□□ -1.55
PDGFBP01127 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.39□□□□□ -1.55
PDGFBP01127 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFBP01127 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFBP01127 AC133552.1-201ENST00000569988 4007 ntBASIC5.39□□□□□ -1.55
PDGFBP01127 AC005224.3-201ENST00000584683 2140 ntBASIC5.39□□□□□ -1.55
PDGFBP01127 AC006511.3-201ENST00000624929 1783 ntBASIC5.39□□□□□ -1.55
PDGFBP01127 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFBP01127 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.39□□□□□ -1.55
PDGFBP01127 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.39□□□□□ -1.55
PDGFBP01127 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFBP01127 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PDGFBP01127 AC100871.1-201ENST00000507871 1456 ntBASIC5.39□□□□□ -1.55
PDGFBP01127 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
PDGFBP01127 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFBP01127 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFBP01127 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFBP01127 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFBP01127 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.38□□□□□ -1.55
PDGFBP01127 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFBP01127 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFBP01127 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.38□□□□□ -1.55
PDGFBP01127 RNU6-249P-201ENST00000363016 102 ntBASIC5.38□□□□□ -1.55
PDGFBP01127 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.38□□□□□ -1.55
PDGFBP01127 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.38□□□□□ -1.55
PDGFBP01127 RCC2P2-201ENST00000422174 918 ntBASIC5.38□□□□□ -1.55
PDGFBP01127 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.38□□□□□ -1.55
PDGFBP01127 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.38□□□□□ -1.55
PDGFBP01127 AL392003.1-201ENST00000434394 243 ntBASIC5.38□□□□□ -1.55
PDGFBP01127 NANOGP9-201ENST00000439890 892 ntBASIC5.38□□□□□ -1.55
PDGFBP01127 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.38□□□□□ -1.55
PDGFBP01127 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.38□□□□□ -1.55
PDGFBP01127 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.38□□□□□ -1.55
PDGFBP01127 HMGN1P8-201ENST00000463578 288 ntBASIC5.38□□□□□ -1.55
PDGFBP01127 SEPT7P6-201ENST00000469999 1143 ntBASIC5.38□□□□□ -1.55
PDGFBP01127 AC140172.1-201ENST00000502928 141 ntBASIC5.38□□□□□ -1.55
PDGFBP01127 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.38□□□□□ -1.55
PDGFBP01127 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.38□□□□□ -1.55
PDGFBP01127 RNU6-319P-201ENST00000516025 108 ntBASIC5.38□□□□□ -1.55
PDGFBP01127 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.38□□□□□ -1.55
PDGFBP01127 GCSHP4-201ENST00000538792 439 ntBASIC5.38□□□□□ -1.55
PDGFBP01127 AL049779.3-201ENST00000557141 606 ntBASIC5.38□□□□□ -1.55
PDGFBP01127 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.38□□□□□ -1.55
PDGFBP01127 MIR4420-201ENST00000583944 77 ntBASIC5.38□□□□□ -1.55
PDGFBP01127 AP000769.2-201ENST00000602344 396 ntBASIC5.38□□□□□ -1.55
PDGFBP01127 AC243960.7-201ENST00000623532 707 ntBASIC5.38□□□□□ -1.55
PDGFBP01127 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.38□□□□□ -1.55
PDGFBP01127 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFBP01127 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
PDGFBP01127 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
PDGFBP01127 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.38□□□□□ -1.55
PDGFBP01127 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFBP01127 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFBP01127 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFBP01127 NXF4-202ENST00000416098 1465 ntBASIC5.38□□□□□ -1.55
PDGFBP01127 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
PDGFBP01127 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFBP01127 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
PDGFBP01127 AC007996.1-201ENST00000620414 2821 ntBASIC5.38□□□□□ -1.55
PDGFBP01127 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
PDGFBP01127 TTC39DP-201ENST00000416781 1688 ntBASIC5.37□□□□□ -1.55
PDGFBP01127 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PDGFBP01127 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms