Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC188H7C350 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC188H7C350 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CCDC188H7C350 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
CCDC188H7C350 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC188H7C350 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
CCDC188H7C350 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC188H7C350 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC188H7C350 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CCDC188H7C350 AC007342.5-201ENST00000571340 2142 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CCDC188H7C350 AC011447.7-201ENST00000624228 1590 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC188H7C350 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC188H7C350 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC188H7C350 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC188H7C350 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC188H7C350 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC188H7C350 MIR421-201ENST00000365696 85 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CCDC188H7C350 OR8V1P-201ENST00000395193 873 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 AL078599.1-201ENST00000402075 293 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 AL359643.1-201ENST00000404109 423 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 AMZ2P2-201ENST00000406819 1057 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC188H7C350 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC188H7C350 AC013429.2-201ENST00000418798 781 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 AC066692.1-201ENST00000421721 457 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 FAM204CP-201ENST00000424489 642 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 HMGB3P10-201ENST00000434734 572 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 RPL12P18-201ENST00000437175 325 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 RPL12P11-201ENST00000439970 501 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 NPM1P19-201ENST00000450070 712 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 AL445665.1-202ENST00000452436 324 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC188H7C350 AL591473.1-201ENST00000464297 313 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 AC104339.1-201ENST00000465478 348 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 FABP5P6-201ENST00000510588 409 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 AC138938.1-201ENST00000515431 782 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 RNA5SP303-201ENST00000516192 130 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 RNA5SP271-201ENST00000516700 88 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC188H7C350 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC188H7C350 RPL23AP53-201ENST00000521854 457 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC188H7C350 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC188H7C350 AC079600.1-201ENST00000550326 297 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
CCDC188H7C350 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CCDC188H7C350 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC188H7C350 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC188H7C350 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC188H7C350 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.42□□□□□ -1.54
CCDC188H7C350 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CCDC188H7C350 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.42□□□□□ -1.54
CCDC188H7C350 BNIP3P41-202ENST00000616656 861 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 AL591926.1-201ENST00000620542 217 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 AL683826.1-201ENST00000624104 627 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC188H7C350 OR5AC4P-202ENST00000642086 985 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC188H7C350 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC188H7C350 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC188H7C350 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.42□□□□□ -1.54
CCDC188H7C350 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
CCDC188H7C350 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC188H7C350 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.42□□□□□ -1.54
CCDC188H7C350 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC188H7C350 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC188H7C350 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC188H7C350 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC188H7C350 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC188H7C350 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC188H7C350 RNU6-729P-201ENST00000384399 107 ntBASIC5.41□□□□□ -1.54
CCDC188H7C350 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CCDC188H7C350 AC013442.1-201ENST00000397347 228 ntBASIC5.41□□□□□ -1.54
CCDC188H7C350 MIR1271-201ENST00000408537 86 ntBASIC5.41□□□□□ -1.54
CCDC188H7C350 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC188H7C350 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC188H7C350 AL139148.1-201ENST00000427122 680 ntBASIC5.41□□□□□ -1.54
CCDC188H7C350 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC188H7C350 COX6CP13-201ENST00000428703 226 ntBASIC5.41□□□□□ -1.54
CCDC188H7C350 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC188H7C350 FMO7P-201ENST00000436045 768 ntBASIC5.41□□□□□ -1.54
CCDC188H7C350 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC188H7C350 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC188H7C350 AL031584.1-201ENST00000447169 754 ntBASIC5.41□□□□□ -1.54
CCDC188H7C350 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC188H7C350 AL513343.1-201ENST00000451818 792 ntBASIC5.41□□□□□ -1.54
CCDC188H7C350 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC188H7C350 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC188H7C350 RN7SL170P-201ENST00000487098 295 ntBASIC5.41□□□□□ -1.54
CCDC188H7C350 RPL37P23-201ENST00000492641 294 ntBASIC5.41□□□□□ -1.54
CCDC188H7C350 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC188H7C350 AC097173.1-201ENST00000505862 819 ntBASIC5.41□□□□□ -1.54
CCDC188H7C350 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC188H7C350 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC188H7C350 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC188H7C350 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC188H7C350 TRIM77BP-201ENST00000524985 1119 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms