Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AL035661.1-201ENST00000620459 1144 ntBASIC6.72□□□□□ -1.33
PTPDC1A2A3K4 AC063952.1-203ENST00000634410 658 ntBASIC6.72□□□□□ -1.33
PTPDC1A2A3K4 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.72□□□□□ -1.33
PTPDC1A2A3K4 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
PTPDC1A2A3K4 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.72□□□□□ -1.33
PTPDC1A2A3K4 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PTPDC1A2A3K4 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PTPDC1A2A3K4 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
PTPDC1A2A3K4 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
PTPDC1A2A3K4 AC117409.1-201ENST00000470499 1310 ntBASIC6.72□□□□□ -1.33
PTPDC1A2A3K4 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
PTPDC1A2A3K4 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
PTPDC1A2A3K4 AC012321.1-201ENST00000561622 1588 ntBASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 MTHFD2P5-201ENST00000320415 844 ntBASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 SNORD56.4-201ENST00000363883 71 ntBASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 RNU6-31P-201ENST00000384388 108 ntBASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 RNU6-1005P-201ENST00000384519 107 ntBASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 MIR130A-201ENST00000385274 89 ntBASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 U3.25-201ENST00000391209 220 ntBASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 RN7SKP293-201ENST00000411389 296 ntBASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 VN1R21P-201ENST00000426703 765 ntBASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 DSTNP5-201ENST00000427921 523 ntBASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 MTND5P25-201ENST00000430499 799 ntBASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 AL353898.1-201ENST00000444055 238 ntBASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 AC092155.2-201ENST00000454675 477 ntBASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 RPS23P6-201ENST00000466136 431 ntBASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 MTCO3P35-201ENST00000485582 781 ntBASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 DUTP1-201ENST00000493631 470 ntBASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 AL136038.1-201ENST00000497246 351 ntBASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 AP003080.1-202ENST00000526526 915 ntBASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 Z82195.1-201ENST00000604558 398 ntBASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 RMST_10.1-201ENST00000616309 154 ntBASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 RN7SL544P-201ENST00000617232 284 ntBASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 RN7SL763P-201ENST00000620922 284 ntBASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 AL355578.1-201ENST00000607405 1328 ntBASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PTPDC1A2A3K4 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 XKRYP4-201ENST00000414395 483 ntBASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 LIPT1P1-201ENST00000415870 1186 ntBASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 AC002504.1-201ENST00000438281 691 ntBASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 XKRYP5-201ENST00000449659 483 ntBASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 AC074386.1-201ENST00000476560 767 ntBASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 HPRT1P1-201ENST00000509498 657 ntBASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 RNA5SP362-201ENST00000516048 118 ntBASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 AC136777.2-201ENST00000522979 358 ntBASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 GTF2IP11-201ENST00000526931 420 ntBASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 AC008536.1-201ENST00000602872 669 ntBASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
PTPDC1A2A3K4 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PTPDC1A2A3K4 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
PTPDC1A2A3K4 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PTPDC1A2A3K4 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PTPDC1A2A3K4 AC112255.1-201ENST00000624070 2493 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms