Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 MTND5P23-201ENST00000430812 1655 ntBASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 U3.2-201ENST00000362981 210 ntBASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 RNU6-670P-201ENST00000364312 104 ntBASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 MIR105-1-201ENST00000385222 81 ntBASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 AC093655.2-201ENST00000425735 631 ntBASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 ZFAND6P1-201ENST00000434138 605 ntBASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 AL590762.3-201ENST00000436372 640 ntBASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 SNRPFP2-201ENST00000440710 251 ntBASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 CYCSP53-201ENST00000455540 265 ntBASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 RN7SL197P-201ENST00000466981 299 ntBASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 RPL7P6-201ENST00000480903 738 ntBASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 RN7SL423P-201ENST00000486202 304 ntBASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 AC072052.1-201ENST00000496556 306 ntBASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 RNA5SP92-201ENST00000516437 110 ntBASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 RNA5SP373-201ENST00000517271 95 ntBASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 OR4A43P-201ENST00000532938 908 ntBASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 NMNAT1P5-201ENST00000559657 841 ntBASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 AL022394.1-201ENST00000606979 292 ntBASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 AC016542.1-201ENST00000608259 493 ntBASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 MIR6133-201ENST00000617057 108 ntBASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 AC253576.2-201ENST00000618815 580 ntBASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.72□□□□□ -1.49
SNX9Q9Y5X1 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.49
SNX9Q9Y5X1 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
SNX9Q9Y5X1 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
SNX9Q9Y5X1 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SNX9Q9Y5X1 C4BPAP1-201ENST00000415474 1893 ntBASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 RNU6-819P-201ENST00000364116 107 ntBASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 RNU6-564P-201ENST00000410983 104 ntBASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 AL590623.1-201ENST00000427864 105 ntBASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 CNOT7P2-201ENST00000441051 832 ntBASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 RPS15AP29-201ENST00000445539 400 ntBASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 FAR2P1-206ENST00000449736 709 ntBASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 RN7SL799P-201ENST00000475891 298 ntBASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 AC079841.1-201ENST00000481228 950 ntBASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 RPL7P40-201ENST00000481703 745 ntBASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 AC016687.1-201ENST00000482574 353 ntBASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 AC015864.1-201ENST00000496512 544 ntBASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 AC092451.2-201ENST00000538746 658 ntBASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 AC127381.1-201ENST00000555979 939 ntBASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 AC020915.5-201ENST00000596836 964 ntBASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 AC108738.1-201ENST00000603703 237 ntBASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 AC005252.1-201ENST00000604518 1063 ntBASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 AL158211.2-201ENST00000607282 395 ntBASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 SDR42E1P1-201ENST00000611327 477 ntBASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 AC015660.5-201ENST00000623238 564 ntBASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 AP003400.3-201ENST00000624904 346 ntBASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 AC099654.6-201ENST00000636487 512 ntBASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SNX9Q9Y5X1 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms