Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 AP000648.1-201ENST00000529682 397 ntBASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 PCNAP4-201ENST00000532690 730 ntBASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 RPP40P2-201ENST00000603596 712 ntBASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 AL031601.1-201ENST00000605702 394 ntBASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 AC130304.1-201ENST00000622942 2385 ntBASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 TTC39DP-201ENST00000416781 1688 ntBASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AC020656.2-201ENST00000613291 5309 ntBASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AC092079.1-201ENST00000558620 1985 ntBASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AL355488.2-201ENST00000609909 2850 ntBASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 RN7SKP128-201ENST00000364270 303 ntBASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 MIR525-201ENST00000384978 85 ntBASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AC016739.1-201ENST00000405359 345 ntBASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 NPM1P22-201ENST00000427761 952 ntBASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 USP24P1-201ENST00000433802 779 ntBASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 RPL23AP19-201ENST00000436229 369 ntBASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AP006222.1-205ENST00000450734 457 ntBASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AL603882.1-201ENST00000463059 681 ntBASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AC007998.1-201ENST00000474156 672 ntBASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 TRBV8-2-201ENST00000475637 270 ntBASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 PFN1P6-201ENST00000476786 399 ntBASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 TOMM22P4-201ENST00000511318 336 ntBASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 SNORD46.2-201ENST00000516021 102 ntBASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 SNORA19.3-201ENST00000516165 130 ntBASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 MTND2P32-201ENST00000521584 1038 ntBASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 MIR3614-201ENST00000581261 86 ntBASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 COX6CP7-201ENST00000597056 208 ntBASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 EIF1P6-201ENST00000600054 334 ntBASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AL445670.1-201ENST00000618889 801 ntBASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AC026124.2-201ENST00000621847 656 ntBASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AC097063.1-201ENST00000426714 1797 ntBASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
COL4A3BPQ9Y5P4 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
COL4A3BPQ9Y5P4 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
COL4A3BPQ9Y5P4 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
COL4A3BPQ9Y5P4 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AC007159.1-201ENST00000566529 4706 ntBASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AC027228.2-201ENST00000567141 2154 ntBASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AC005224.3-201ENST00000584683 2140 ntBASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL4A3BPQ9Y5P4 RNU6-304P-201ENST00000364855 107 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms