Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 AC116651.1-201ENST00000609724 556 ntBASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 AC073869.7-201ENST00000640874 297 ntBASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 ZNF733P-202ENST00000444809 1573 ntBASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 AC098592.2-201ENST00000413158 265 ntBASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 AC079809.1-201ENST00000415468 276 ntBASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 RNGTTP1-201ENST00000420965 728 ntBASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 OR10T1P-201ENST00000424327 947 ntBASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 AC009784.1-201ENST00000426484 460 ntBASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 NANOGP9-201ENST00000439890 892 ntBASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 CEACAMP7-201ENST00000444105 496 ntBASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 MTND5P8-201ENST00000449817 1083 ntBASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 AL645937.3-201ENST00000453647 936 ntBASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 BX284632.1-201ENST00000478218 541 ntBASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 AC016687.1-201ENST00000482574 353 ntBASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 OR10D4P-201ENST00000525892 951 ntBASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 AP002884.5-201ENST00000595053 1132 ntBASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 AC006363.1-201ENST00000603806 463 ntBASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 AC133644.2-201ENST00000608142 540 ntBASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 OR51C1P-201ENST00000608504 942 ntBASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 Mico1.1-201ENST00000611698 204 ntBASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HDAC6Q9UBN7 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
HDAC6Q9UBN7 ICE2P1-201ENST00000512800 1849 ntBASIC6.09□□□□□ -1.44
HDAC6Q9UBN7 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 AC103591.2-201ENST00000265259 766 ntBASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 AL353625.1-202ENST00000366273 571 ntBASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 MIR550A3-201ENST00000390735 95 ntBASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 DUTP5-201ENST00000406790 469 ntBASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 GPS2P1-201ENST00000411761 986 ntBASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 AL445213.1-201ENST00000412589 747 ntBASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 AL390879.2-203ENST00000426943 1121 ntBASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 RPL17P35-201ENST00000432217 549 ntBASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 FTLP19-201ENST00000433300 394 ntBASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 GSTM5P1-201ENST00000434751 660 ntBASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 AP000949.1-201ENST00000438328 629 ntBASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 AL359265.1-201ENST00000440296 795 ntBASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 AL353718.1-201ENST00000451028 517 ntBASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 RPL7P61-201ENST00000451721 751 ntBASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 AL389915.2-201ENST00000454576 441 ntBASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 RPS17P5-201ENST00000498293 408 ntBASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 SNRPCP2-201ENST00000504370 475 ntBASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 SCARNA16.4-201ENST00000516956 187 ntBASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 PMS2P3-207ENST00000529061 717 ntBASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 RPL10P14-201ENST00000565265 298 ntBASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.08□□□□□ -1.44
HDAC6Q9UBN7 MTND2P13-201ENST00000577438 1039 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms