Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AL354890.1-201ENST00000413730 346 ntBASIC5.51□□□□□ -1.53
LRFN1Q9P244 RPL35AP3-201ENST00000414680 288 ntBASIC5.51□□□□□ -1.53
LRFN1Q9P244 LIPT1P1-201ENST00000415870 1186 ntBASIC5.51□□□□□ -1.53
LRFN1Q9P244 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.51□□□□□ -1.53
LRFN1Q9P244 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.51□□□□□ -1.53
LRFN1Q9P244 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.51□□□□□ -1.53
LRFN1Q9P244 NMD3P2-201ENST00000421815 761 ntBASIC5.51□□□□□ -1.53
LRFN1Q9P244 MTND6P12-201ENST00000428247 522 ntBASIC5.51□□□□□ -1.53
LRFN1Q9P244 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.51□□□□□ -1.53
LRFN1Q9P244 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.51□□□□□ -1.53
LRFN1Q9P244 BMS1P10-201ENST00000443754 1120 ntBASIC5.51□□□□□ -1.53
LRFN1Q9P244 AL050341.1-201ENST00000447743 313 ntBASIC5.51□□□□□ -1.53
LRFN1Q9P244 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LRFN1Q9P244 AC112187.1-201ENST00000455837 479 ntBASIC5.51□□□□□ -1.53
LRFN1Q9P244 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.51□□□□□ -1.53
LRFN1Q9P244 TPT1P1-201ENST00000458495 518 ntBASIC5.51□□□□□ -1.53
LRFN1Q9P244 METTL15P1-201ENST00000481421 1045 ntBASIC5.51□□□□□ -1.53
LRFN1Q9P244 AC005912.1-201ENST00000495392 255 ntBASIC5.51□□□□□ -1.53
LRFN1Q9P244 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.51□□□□□ -1.53
LRFN1Q9P244 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LRFN1Q9P244 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRFN1Q9P244 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.51□□□□□ -1.53
LRFN1Q9P244 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.51□□□□□ -1.53
LRFN1Q9P244 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.51□□□□□ -1.53
LRFN1Q9P244 AC068714.1-201ENST00000559623 800 ntBASIC5.51□□□□□ -1.53
LRFN1Q9P244 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.51□□□□□ -1.53
LRFN1Q9P244 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.51□□□□□ -1.53
LRFN1Q9P244 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.51□□□□□ -1.53
LRFN1Q9P244 OR4H6P-201ENST00000563771 921 ntBASIC5.51□□□□□ -1.53
LRFN1Q9P244 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.51□□□□□ -1.53
LRFN1Q9P244 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LRFN1Q9P244 COX6CP7-201ENST00000597056 208 ntBASIC5.51□□□□□ -1.53
LRFN1Q9P244 AC034229.4-201ENST00000607861 441 ntBASIC5.51□□□□□ -1.53
LRFN1Q9P244 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.51□□□□□ -1.53
LRFN1Q9P244 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.51□□□□□ -1.53
LRFN1Q9P244 AC127024.6-201ENST00000621598 424 ntBASIC5.51□□□□□ -1.53
LRFN1Q9P244 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.51□□□□□ -1.53
LRFN1Q9P244 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.51□□□□□ -1.53
LRFN1Q9P244 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LRFN1Q9P244 WDR95P-201ENST00000425638 1542 ntBASIC5.51□□□□□ -1.53
LRFN1Q9P244 AC106754.1-201ENST00000562632 1513 ntBASIC5.51□□□□□ -1.53
LRFN1Q9P244 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LRFN1Q9P244 RNF6P1-201ENST00000444889 1784 ntBASIC5.51□□□□□ -1.53
LRFN1Q9P244 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRFN1Q9P244 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRFN1Q9P244 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRFN1Q9P244 AP001284.1-201ENST00000528393 2118 ntBASIC5.51□□□□□ -1.53
LRFN1Q9P244 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRFN1Q9P244 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LRFN1Q9P244 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LRFN1Q9P244 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRFN1Q9P244 TTC39DP-201ENST00000416781 1688 ntBASIC5.5□□□□□ -1.53
LRFN1Q9P244 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRFN1Q9P244 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRFN1Q9P244 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRFN1Q9P244 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 SHQ1P1-201ENST00000437111 1544 ntBASIC5.5□□□□□ -1.53
LRFN1Q9P244 AL591135.1-201ENST00000401578 5914 ntBASIC5.5□□□□□ -1.53
LRFN1Q9P244 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRFN1Q9P244 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRFN1Q9P244 RNU6-236P-201ENST00000363886 106 ntBASIC5.5□□□□□ -1.53
LRFN1Q9P244 RN7SKP128-201ENST00000364270 303 ntBASIC5.5□□□□□ -1.53
LRFN1Q9P244 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRFN1Q9P244 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRFN1Q9P244 RNU6-317P-201ENST00000384031 107 ntBASIC5.5□□□□□ -1.53
LRFN1Q9P244 AC016739.1-201ENST00000405359 345 ntBASIC5.5□□□□□ -1.53
LRFN1Q9P244 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 RNA5SP178-201ENST00000410380 128 ntBASIC5.5□□□□□ -1.53
LRFN1Q9P244 RNA5SP251-201ENST00000410614 137 ntBASIC5.5□□□□□ -1.53
LRFN1Q9P244 AC092745.2-202ENST00000411880 369 ntBASIC5.5□□□□□ -1.53
LRFN1Q9P244 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 USP9YP21-201ENST00000420603 432 ntBASIC5.5□□□□□ -1.53
LRFN1Q9P244 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 RRM2P4-201ENST00000441721 562 ntBASIC5.5□□□□□ -1.53
LRFN1Q9P244 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LRFN1Q9P244 RN7SL177P-201ENST00000476596 299 ntBASIC5.5□□□□□ -1.53
LRFN1Q9P244 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 AC008565.1-201ENST00000509046 885 ntBASIC5.5□□□□□ -1.53
LRFN1Q9P244 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LRFN1Q9P244 AC027308.1-201ENST00000517993 110 ntBASIC5.5□□□□□ -1.53
LRFN1Q9P244 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 AP001372.4-201ENST00000524889 472 ntBASIC5.5□□□□□ -1.53
LRFN1Q9P244 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LRFN1Q9P244 AP000648.1-201ENST00000529682 397 ntBASIC5.5□□□□□ -1.53
LRFN1Q9P244 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms