Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.8□□□□□ -1.64
VAPAQ9P0L0 MUC2-202ENST00000613187 4845 ntBASIC4.8□□□□□ -1.64
VAPAQ9P0L0 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.8□□□□□ -1.64
VAPAQ9P0L0 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 AC068446.1-201ENST00000556425 1549 ntBASIC4.79□□□□□ -1.64
VAPAQ9P0L0 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 RNA5SP510-201ENST00000364697 99 ntBASIC4.79□□□□□ -1.64
VAPAQ9P0L0 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 UBBP2-201ENST00000376781 231 ntBASIC4.79□□□□□ -1.64
VAPAQ9P0L0 CXADRP1-201ENST00000398098 1095 ntBASIC4.79□□□□□ -1.64
VAPAQ9P0L0 AL078599.1-201ENST00000402075 293 ntBASIC4.79□□□□□ -1.64
VAPAQ9P0L0 NUDT19P3-201ENST00000404698 555 ntBASIC4.79□□□□□ -1.64
VAPAQ9P0L0 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.79□□□□□ -1.64
VAPAQ9P0L0 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 RPL36AP10-201ENST00000421785 322 ntBASIC4.79□□□□□ -1.64
VAPAQ9P0L0 FAM96AP1-201ENST00000430879 482 ntBASIC4.79□□□□□ -1.64
VAPAQ9P0L0 BX323845.1-201ENST00000432417 179 ntBASIC4.79□□□□□ -1.64
VAPAQ9P0L0 ARAFP2-201ENST00000440565 559 ntBASIC4.79□□□□□ -1.64
VAPAQ9P0L0 TXNP5-201ENST00000441043 315 ntBASIC4.79□□□□□ -1.64
VAPAQ9P0L0 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 AC094085.1-201ENST00000468914 584 ntBASIC4.79□□□□□ -1.64
VAPAQ9P0L0 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 RN7SL649P-201ENST00000496974 275 ntBASIC4.79□□□□□ -1.64
VAPAQ9P0L0 PFN1P8-201ENST00000497012 543 ntBASIC4.79□□□□□ -1.64
VAPAQ9P0L0 RPS4XP20-201ENST00000505751 772 ntBASIC4.79□□□□□ -1.64
VAPAQ9P0L0 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 AC104695.2-201ENST00000605056 775 ntBASIC4.79□□□□□ -1.64
VAPAQ9P0L0 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 CXADRP3-202ENST00000617265 1100 ntBASIC4.79□□□□□ -1.64
VAPAQ9P0L0 WBP1LP8-201ENST00000617401 327 ntBASIC4.79□□□□□ -1.64
VAPAQ9P0L0 AL691477.1-201ENST00000624398 162 ntBASIC4.79□□□□□ -1.64
VAPAQ9P0L0 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.79□□□□□ -1.64
VAPAQ9P0L0 AP001642.1-201ENST00000624727 2117 ntBASIC4.79□□□□□ -1.64
VAPAQ9P0L0 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VAPAQ9P0L0 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 AL450023.3-201ENST00000440592 271 ntBASIC4.78□□□□□ -1.64
VAPAQ9P0L0 PCNPP2-201ENST00000441651 455 ntBASIC4.78□□□□□ -1.64
VAPAQ9P0L0 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 AL691482.1-201ENST00000453255 87 ntBASIC4.78□□□□□ -1.64
VAPAQ9P0L0 YWHAEP1-201ENST00000453697 763 ntBASIC4.78□□□□□ -1.64
VAPAQ9P0L0 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 Z92846.1-201ENST00000456203 268 ntBASIC4.78□□□□□ -1.64
VAPAQ9P0L0 GYG1P1-201ENST00000460864 698 ntBASIC4.78□□□□□ -1.64
VAPAQ9P0L0 RPS17P2-201ENST00000461663 408 ntBASIC4.78□□□□□ -1.64
VAPAQ9P0L0 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 AP000942.1-201ENST00000463969 747 ntBASIC4.78□□□□□ -1.64
VAPAQ9P0L0 RN7SL443P-201ENST00000464331 290 ntBASIC4.78□□□□□ -1.64
VAPAQ9P0L0 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 RN7SL547P-201ENST00000490793 290 ntBASIC4.78□□□□□ -1.64
VAPAQ9P0L0 AC015864.1-201ENST00000496512 544 ntBASIC4.78□□□□□ -1.64
VAPAQ9P0L0 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 GTF2F2P1-201ENST00000511083 675 ntBASIC4.78□□□□□ -1.64
VAPAQ9P0L0 RNA5SP249-201ENST00000516127 99 ntBASIC4.78□□□□□ -1.64
VAPAQ9P0L0 AC027544.3-201ENST00000535082 757 ntBASIC4.78□□□□□ -1.64
VAPAQ9P0L0 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 AL049830.4-201ENST00000555149 351 ntBASIC4.78□□□□□ -1.64
VAPAQ9P0L0 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 AC069307.1-201ENST00000602820 447 ntBASIC4.78□□□□□ -1.64
VAPAQ9P0L0 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 AP001962.1-201ENST00000624114 559 ntBASIC4.78□□□□□ -1.64
VAPAQ9P0L0 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms