Protein–RNA interactions for Protein: Q9NUW8

TDP1, Tyrosyl-DNA phosphodiesterase 1, humanhuman

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1Q9NUW8 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.03□□□□□ -1.44
TDP1Q9NUW8 CCDC58P3-201ENST00000590792 430 ntBASIC6.03□□□□□ -1.44
TDP1Q9NUW8 MIR132-201ENST00000591554 101 ntBASIC6.03□□□□□ -1.44
TDP1Q9NUW8 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC6.03□□□□□ -1.44
TDP1Q9NUW8 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.03□□□□□ -1.44
TDP1Q9NUW8 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.03□□□□□ -1.44
TDP1Q9NUW8 AC008536.1-201ENST00000602872 669 ntBASIC6.03□□□□□ -1.44
TDP1Q9NUW8 AC009948.4-201ENST00000604692 675 ntBASIC6.03□□□□□ -1.44
TDP1Q9NUW8 AC024060.1-201ENST00000607052 494 ntBASIC6.03□□□□□ -1.44
TDP1Q9NUW8 AC008115.3-201ENST00000614874 549 ntBASIC6.03□□□□□ -1.44
TDP1Q9NUW8 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.03□□□□□ -1.44
TDP1Q9NUW8 AP003485.2-201ENST00000623636 610 ntBASIC6.03□□□□□ -1.44
TDP1Q9NUW8 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TDP1Q9NUW8 AP000547.3-204ENST00000588548 2523 ntBASIC6.03□□□□□ -1.44
TDP1Q9NUW8 AL121768.1-201ENST00000613917 2544 ntBASIC6.03□□□□□ -1.44
TDP1Q9NUW8 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TDP1Q9NUW8 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TDP1Q9NUW8 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
TDP1Q9NUW8 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TDP1Q9NUW8 AC017007.4-201ENST00000503353 1352 ntBASIC6.03□□□□□ -1.44
TDP1Q9NUW8 MTND4P8-201ENST00000514997 1362 ntBASIC6.03□□□□□ -1.44
TDP1Q9NUW8 AC011504.1-201ENST00000623331 4103 ntBASIC6.03□□□□□ -1.44
TDP1Q9NUW8 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TDP1Q9NUW8 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
TDP1Q9NUW8 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TDP1Q9NUW8 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
TDP1Q9NUW8 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
TDP1Q9NUW8 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 RN7SKP124-201ENST00000364730 341 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 MT-TP-201ENST00000387461 68 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AC233289.1-201ENST00000403700 508 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 RNU4-22P-201ENST00000411058 166 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AC092638.1-201ENST00000411966 1275 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 OR6E1P-201ENST00000414424 923 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AL590806.1-201ENST00000415818 853 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 TNPO1P1-201ENST00000423641 1138 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 ETF1P3-201ENST00000430422 1160 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AC004022.1-201ENST00000447766 1066 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AC098583.1-201ENST00000480875 255 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AC009120.1-201ENST00000493458 473 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AC008945.1-201ENST00000505144 499 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 DUTP7-201ENST00000507982 486 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 RN7SKP288-201ENST00000516227 268 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AC021678.3-201ENST00000517893 476 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AC027308.1-201ENST00000517993 110 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 IGKV2-19-201ENST00000518132 283 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 MRPS16P1-201ENST00000523462 412 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 LRRC6P1-201ENST00000532188 885 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AC087897.1-201ENST00000550134 156 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AL049870.4-201ENST00000555741 486 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AC145350.1-201ENST00000567426 208 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 MIR1273E-201ENST00000581165 102 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AP002906.1-201ENST00000603405 233 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AC079395.2-201ENST00000610982 737 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AC093783.1-201ENST00000612976 329 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 U1.34-201ENST00000618578 162 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 AC139713.2-210ENST00000641741 992 ntBASIC6.02□□□□□ -1.45
TDP1Q9NUW8 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
TDP1Q9NUW8 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms