Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC009506.2-201ENST00000420635 840 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 RBMY2TP-201ENST00000451162 947 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 AC140172.1-201ENST00000502928 141 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 AC010350.1-201ENST00000504908 231 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 AC016559.2-201ENST00000510759 359 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 RNA5SP228-201ENST00000516232 133 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 AC012400.1-201ENST00000518452 381 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 MORF4L1P3-201ENST00000525966 950 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 MIR6820-201ENST00000611508 62 ntBASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KIAA1549Q9HCM3 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 AC004817.4-201ENST00000602396 3625 ntBASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 RN7SKP149-201ENST00000363008 344 ntBASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 SNORA73.1-201ENST00000363107 205 ntBASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 RN7SKP153-201ENST00000365026 316 ntBASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 CYB5AP4-201ENST00000396692 399 ntBASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 GJA6P-201ENST00000415117 1042 ntBASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 AC073052.1-201ENST00000440417 714 ntBASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 NDUFA5P8-201ENST00000449019 346 ntBASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 TCEA1P1-201ENST00000449716 880 ntBASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 HMGB1P4-201ENST00000455362 567 ntBASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 AC098976.1-201ENST00000513014 541 ntBASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 AC119674.1-217ENST00000641942 1086 ntBASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 MIR133A2-201ENST00000347538 102 ntBASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 RPL10P10-201ENST00000403509 664 ntBASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 OR51B3P-201ENST00000412287 913 ntBASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 AC011753.3-201ENST00000443436 406 ntBASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 AC093890.1-201ENST00000502554 540 ntBASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 MRPS33P2-201ENST00000507850 322 ntBASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 AC105254.2-201ENST00000603636 436 ntBASIC4.53□□□□□ -1.68
KIAA1549Q9HCM3 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 AC006484.1-201ENST00000435086 1884 ntBASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 AC093591.2-201ENST00000565254 3843 ntBASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 MIPEPP2-201ENST00000422560 1819 ntBASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 AC016772.1-201ENST00000444170 1261 ntBASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 RPL31P44-201ENST00000447680 377 ntBASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
KIAA1549Q9HCM3 AC022360.1-201ENST00000521058 340 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms