Protein–RNA interactions for Protein: Q9C0C6

CIPC, CLOCK-interacting pacemaker, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIPCQ9C0C6 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.72□□□□□ -1.49
CIPCQ9C0C6 AC093875.1-201ENST00000623688 504 ntBASIC5.72□□□□□ -1.49
CIPCQ9C0C6 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CIPCQ9C0C6 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.72□□□□□ -1.49
CIPCQ9C0C6 MTCO1P15-201ENST00000529569 1526 ntBASIC5.72□□□□□ -1.49
CIPCQ9C0C6 AL161912.4-201ENST00000623889 2468 ntBASIC5.72□□□□□ -1.49
CIPCQ9C0C6 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CIPCQ9C0C6 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
CIPCQ9C0C6 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CIPCQ9C0C6 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CIPCQ9C0C6 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CIPCQ9C0C6 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
CIPCQ9C0C6 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CIPCQ9C0C6 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CIPCQ9C0C6 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
CIPCQ9C0C6 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CIPCQ9C0C6 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 U3.7-201ENST00000363668 216 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 RNU6-354P-201ENST00000383862 107 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 RNU6-610P-201ENST00000384264 107 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 RPL11P3-201ENST00000395256 523 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AC096533.1-201ENST00000411645 353 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AC007563.3-201ENST00000433233 371 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 LDHAP2-201ENST00000437325 985 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 RAB28P3-201ENST00000448325 597 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 METTL15P1-201ENST00000481421 1045 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 RPS7P6-201ENST00000485777 579 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 UBA52P7-201ENST00000486088 380 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 PDCL3P4-201ENST00000489621 720 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AC020699.1-201ENST00000505161 445 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 SUMO2P5-201ENST00000506790 245 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 ST13P12-201ENST00000508958 1094 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 IGLV3-24-201ENST00000517477 197 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AC010476.1-201ENST00000519111 851 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AC023538.1-201ENST00000534576 736 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AC087894.1-201ENST00000538359 518 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AC023825.1-201ENST00000566704 1030 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 MIR4311-201ENST00000580794 100 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AC060780.2-201ENST00000589047 198 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 OR7E18P-201ENST00000592589 702 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 VN1R87P-201ENST00000596706 487 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AL606834.3-201ENST00000602615 496 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 ELOCP35-201ENST00000604289 336 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AL451064.1-201ENST00000607718 471 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 MIR6837-201ENST00000620884 64 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AC090617.9-201ENST00000623751 147 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AC120349.3-201ENST00000624377 529 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AP000676.4-201ENST00000624659 623 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 CASC19-264ENST00000641912 1184 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AC144833.1-201ENST00000567953 4089 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 AC123769.1-201ENST00000530992 3192 ntBASIC5.71□□□□□ -1.5
CIPCQ9C0C6 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.71□□□□□ -1.5
CIPCQ9C0C6 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CIPCQ9C0C6 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CIPCQ9C0C6 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms