Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ABCA3Q99758 AL158073.1-201ENST00000426848 1104 ntBASIC6.53□□□□□ -1.36
ABCA3Q99758 AL590399.2-201ENST00000427536 309 ntBASIC6.53□□□□□ -1.36
ABCA3Q99758 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC6.53□□□□□ -1.36
ABCA3Q99758 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC6.53□□□□□ -1.36
ABCA3Q99758 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.53□□□□□ -1.36
ABCA3Q99758 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.53□□□□□ -1.36
ABCA3Q99758 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.53□□□□□ -1.36
ABCA3Q99758 GLRXP2-201ENST00000555594 321 ntBASIC6.53□□□□□ -1.36
ABCA3Q99758 MIR3138-201ENST00000585238 82 ntBASIC6.53□□□□□ -1.36
ABCA3Q99758 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC6.53□□□□□ -1.36
ABCA3Q99758 LINC02035-201ENST00000610128 5476 ntBASIC6.53□□□□□ -1.36
ABCA3Q99758 AC024941.1-201ENST00000612250 334 ntBASIC6.53□□□□□ -1.36
ABCA3Q99758 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ABCA3Q99758 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
ABCA3Q99758 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.53□□□□□ -1.36
ABCA3Q99758 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
ABCA3Q99758 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ABCA3Q99758 AL117378.2-201ENST00000622916 1337 ntBASIC6.53□□□□□ -1.36
ABCA3Q99758 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
ABCA3Q99758 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ABCA3Q99758 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ABCA3Q99758 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
ABCA3Q99758 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ABCA3Q99758 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ABCA3Q99758 RNU1-82P-201ENST00000390851 165 ntBASIC6.53□□□□□ -1.36
ABCA3Q99758 LRRC37BP1-201ENST00000398851 714 ntBASIC6.53□□□□□ -1.36
ABCA3Q99758 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.53□□□□□ -1.36
ABCA3Q99758 AC006065.1-201ENST00000422539 802 ntBASIC6.53□□□□□ -1.36
ABCA3Q99758 NDUFB4P8-201ENST00000435351 367 ntBASIC6.53□□□□□ -1.36
ABCA3Q99758 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC6.53□□□□□ -1.36
ABCA3Q99758 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.53□□□□□ -1.36
ABCA3Q99758 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.53□□□□□ -1.36
ABCA3Q99758 MTND2P28-201ENST00000457540 1044 ntBASIC6.53□□□□□ -1.36
ABCA3Q99758 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.53□□□□□ -1.36
ABCA3Q99758 AC015795.1-201ENST00000513669 327 ntBASIC6.53□□□□□ -1.36
ABCA3Q99758 MTCO1P35-201ENST00000515270 228 ntBASIC6.53□□□□□ -1.36
ABCA3Q99758 RNA5SP143-201ENST00000516936 115 ntBASIC6.53□□□□□ -1.36
ABCA3Q99758 AC026688.1-201ENST00000520639 1168 ntBASIC6.53□□□□□ -1.36
ABCA3Q99758 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC6.53□□□□□ -1.36
ABCA3Q99758 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ABCA3Q99758 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
ABCA3Q99758 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC6.53□□□□□ -1.36
ABCA3Q99758 AC073091.2-201ENST00000603205 907 ntBASIC6.53□□□□□ -1.36
ABCA3Q99758 AC100847.1-201ENST00000611316 481 ntBASIC6.53□□□□□ -1.36
ABCA3Q99758 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC6.53□□□□□ -1.36
ABCA3Q99758 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
ABCA3Q99758 NBPF8-201ENST00000583271 5330 ntBASIC6.53□□□□□ -1.36
ABCA3Q99758 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ABCA3Q99758 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ABCA3Q99758 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC6.52□□□□□ -1.37
ABCA3Q99758 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ABCA3Q99758 PTER-201ENST00000298942 3448 ntTSL 5 BASIC6.52□□□□□ -1.37
ABCA3Q99758 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ABCA3Q99758 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.52□□□□□ -1.37
ABCA3Q99758 AC108751.5-201ENST00000492880 1336 ntBASIC6.52□□□□□ -1.37
ABCA3Q99758 SAMMSON-210ENST00000641260 1308 ntBASIC6.52□□□□□ -1.37
ABCA3Q99758 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ABCA3Q99758 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ABCA3Q99758 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.52□□□□□ -1.37
ABCA3Q99758 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
ABCA3Q99758 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ABCA3Q99758 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ABCA3Q99758 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC6.52□□□□□ -1.37
ABCA3Q99758 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.52□□□□□ -1.37
ABCA3Q99758 RPL23AP24-201ENST00000458203 385 ntBASIC6.52□□□□□ -1.37
ABCA3Q99758 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
ABCA3Q99758 AC007016.1-201ENST00000512110 244 ntBASIC6.52□□□□□ -1.37
ABCA3Q99758 IGKV3OR22-2-201ENST00000517943 313 ntBASIC6.52□□□□□ -1.37
ABCA3Q99758 AC022360.1-201ENST00000521058 340 ntBASIC6.52□□□□□ -1.37
ABCA3Q99758 AC084824.2-201ENST00000548906 345 ntBASIC6.52□□□□□ -1.37
ABCA3Q99758 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC6.52□□□□□ -1.37
ABCA3Q99758 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC6.52□□□□□ -1.37
ABCA3Q99758 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.52□□□□□ -1.37
ABCA3Q99758 AL161637.1-201ENST00000622380 412 ntBASIC6.52□□□□□ -1.37
ABCA3Q99758 AC004232.3-201ENST00000622977 525 ntBASIC6.52□□□□□ -1.37
ABCA3Q99758 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC6.52□□□□□ -1.37
ABCA3Q99758 OR8B1P-202ENST00000641132 1178 ntBASIC6.52□□□□□ -1.37
ABCA3Q99758 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ABCA3Q99758 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.52□□□□□ -1.37
ABCA3Q99758 PRNCR1-201ENST00000635449 12727 ntBASIC6.52□□□□□ -1.37
ABCA3Q99758 MSL3P1-202ENST00000440028 1468 ntBASIC6.52□□□□□ -1.37
ABCA3Q99758 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC6.52□□□□□ -1.37
ABCA3Q99758 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ABCA3Q99758 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ABCA3Q99758 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC6.52□□□□□ -1.37
ABCA3Q99758 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ABCA3Q99758 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ABCA3Q99758 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ABCA3Q99758 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.51□□□□□ -1.37
ABCA3Q99758 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
ABCA3Q99758 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
ABCA3Q99758 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.51□□□□□ -1.37
ABCA3Q99758 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ABCA3Q99758 GAPDHP49-201ENST00000421421 961 ntBASIC6.51□□□□□ -1.37
ABCA3Q99758 BX679664.2-201ENST00000439282 283 ntBASIC6.51□□□□□ -1.37
ABCA3Q99758 YWHAZP2-201ENST00000440317 728 ntBASIC6.51□□□□□ -1.37
ABCA3Q99758 PSAT1P4-201ENST00000466500 526 ntBASIC6.51□□□□□ -1.37
ABCA3Q99758 AC010618.1-201ENST00000469924 477 ntBASIC6.51□□□□□ -1.37
ABCA3Q99758 RPL7AP10-201ENST00000481016 791 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms