Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 SETP8-201ENST00000435341 628 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 MTCYBP31-201ENST00000438855 1122 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 AC073465.2-201ENST00000440938 498 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 AL591719.1-201ENST00000444669 744 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 AL596266.1-201ENST00000448132 400 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 AZGP1P2-201ENST00000454506 345 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 AC005165.2-201ENST00000466070 380 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 UBFD1P1-201ENST00000473259 814 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 AL117692.1-201ENST00000494283 713 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 LSM3P4-201ENST00000502948 309 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 AC025458.1-201ENST00000506046 166 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 AC079064.1-201ENST00000528365 362 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 MTCYBP23-201ENST00000558717 1102 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 MIR4311-201ENST00000580794 100 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 AL365400.2-201ENST00000605604 902 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 AL162574.1-201ENST00000615702 950 ntBASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.78□□□□□ -1.48
ATG4AQ8WYN0 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 RNU4-40P-201ENST00000364351 143 ntBASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 AL356968.2-201ENST00000412769 1257 ntBASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 BTF3P9-201ENST00000418784 283 ntBASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 AK4P4-201ENST00000419465 646 ntBASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 AC245047.2-201ENST00000441060 530 ntBASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 AL358794.1-201ENST00000445689 381 ntBASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 AC093166.2-201ENST00000455969 1017 ntBASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 RPS23P6-201ENST00000466136 431 ntBASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 RN7SL583P-201ENST00000475692 287 ntBASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 CR383656.1-201ENST00000484916 377 ntBASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 MTCYBP35-201ENST00000503630 1137 ntBASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 AC021146.7-201ENST00000509604 775 ntBASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 RNU6-311P-201ENST00000516224 102 ntBASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 HAUS1P3-201ENST00000523909 662 ntBASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 DPPA2P4-201ENST00000563717 878 ntBASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 VN1R87P-201ENST00000596706 487 ntBASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 AC106052.1-201ENST00000608029 497 ntBASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 AL355493.4-201ENST00000618530 292 ntBASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
ATG4AQ8WYN0 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 AL360270.2-201ENST00000562952 5985 ntBASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 MIR133A2-201ENST00000347538 102 ntBASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 SNORA5.1-201ENST00000384275 131 ntBASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 AP002784.2-201ENST00000397300 549 ntBASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 RPL5P19-201ENST00000404228 893 ntBASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 AL445183.3-201ENST00000414168 502 ntBASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.76□□□□□ -1.49
ATG4AQ8WYN0 AC127526.2-201ENST00000426436 775 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms