Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SNED1Q8TER0 AC017019.1-201ENST00000426129 261 ntBASIC6.13□□□□□ -1.43
SNED1Q8TER0 NRBF2P3-201ENST00000432731 865 ntBASIC6.13□□□□□ -1.43
SNED1Q8TER0 MTND2P40-201ENST00000436718 841 ntBASIC6.13□□□□□ -1.43
SNED1Q8TER0 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC6.13□□□□□ -1.43
SNED1Q8TER0 AL359265.1-201ENST00000440296 795 ntBASIC6.13□□□□□ -1.43
SNED1Q8TER0 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC6.13□□□□□ -1.43
SNED1Q8TER0 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.13□□□□□ -1.43
SNED1Q8TER0 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6.13□□□□□ -1.43
SNED1Q8TER0 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SNED1Q8TER0 AP003080.1-202ENST00000526526 915 ntBASIC6.13□□□□□ -1.43
SNED1Q8TER0 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.13□□□□□ -1.43
SNED1Q8TER0 AC009643.1-201ENST00000532030 391 ntBASIC6.13□□□□□ -1.43
SNED1Q8TER0 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.13□□□□□ -1.43
SNED1Q8TER0 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.13□□□□□ -1.43
SNED1Q8TER0 MIR6839-201ENST00000620425 113 ntBASIC6.13□□□□□ -1.43
SNED1Q8TER0 AL359757.1-201ENST00000623176 255 ntBASIC6.13□□□□□ -1.43
SNED1Q8TER0 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
SNED1Q8TER0 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SNED1Q8TER0 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SNED1Q8TER0 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SNED1Q8TER0 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
SNED1Q8TER0 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SNED1Q8TER0 AC007159.1-201ENST00000566529 4706 ntBASIC6.13□□□□□ -1.43
SNED1Q8TER0 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SNED1Q8TER0 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
SNED1Q8TER0 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.12□□□□□ -1.43
SNED1Q8TER0 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.12□□□□□ -1.43
SNED1Q8TER0 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SNED1Q8TER0 AC099654.2-201ENST00000433031 1980 ntBASIC6.12□□□□□ -1.43
SNED1Q8TER0 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.12□□□□□ -1.43
SNED1Q8TER0 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
SNED1Q8TER0 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.12□□□□□ -1.43
SNED1Q8TER0 RNU4-39P-201ENST00000362455 127 ntBASIC6.12□□□□□ -1.43
SNED1Q8TER0 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNED1Q8TER0 SNORA2.3-201ENST00000383920 135 ntBASIC6.12□□□□□ -1.43
SNED1Q8TER0 U3.30-201ENST00000391308 210 ntBASIC6.12□□□□□ -1.43
SNED1Q8TER0 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SNED1Q8TER0 AL592293.2-201ENST00000422292 996 ntBASIC6.12□□□□□ -1.43
SNED1Q8TER0 AC004975.1-201ENST00000428733 208 ntBASIC6.12□□□□□ -1.43
SNED1Q8TER0 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SNED1Q8TER0 ARL4AP4-201ENST00000434170 518 ntBASIC6.12□□□□□ -1.43
SNED1Q8TER0 MTCYBP21-201ENST00000443300 1113 ntBASIC6.12□□□□□ -1.43
SNED1Q8TER0 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC6.12□□□□□ -1.43
SNED1Q8TER0 AC010733.1-201ENST00000451515 401 ntBASIC6.12□□□□□ -1.43
SNED1Q8TER0 RN7SL189P-201ENST00000468631 289 ntBASIC6.12□□□□□ -1.43
SNED1Q8TER0 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SNED1Q8TER0 RPS12P31-201ENST00000491419 398 ntBASIC6.12□□□□□ -1.43
SNED1Q8TER0 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.12□□□□□ -1.43
SNED1Q8TER0 RN7SKP276-201ENST00000516242 268 ntBASIC6.12□□□□□ -1.43
SNED1Q8TER0 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.12□□□□□ -1.43
SNED1Q8TER0 AC012339.2-201ENST00000523996 453 ntBASIC6.12□□□□□ -1.43
SNED1Q8TER0 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC6.12□□□□□ -1.43
SNED1Q8TER0 MIR4675-201ENST00000577898 77 ntBASIC6.12□□□□□ -1.43
SNED1Q8TER0 BNIP3P35-201ENST00000604530 490 ntBASIC6.12□□□□□ -1.43
SNED1Q8TER0 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.12□□□□□ -1.43
SNED1Q8TER0 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SNED1Q8TER0 AC021106.3-201ENST00000623925 531 ntBASIC6.12□□□□□ -1.43
SNED1Q8TER0 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.12□□□□□ -1.43
SNED1Q8TER0 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.12□□□□□ -1.43
SNED1Q8TER0 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.12□□□□□ -1.43
SNED1Q8TER0 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.12□□□□□ -1.43
SNED1Q8TER0 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNED1Q8TER0 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SNED1Q8TER0 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNED1Q8TER0 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNED1Q8TER0 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.12□□□□□ -1.43
SNED1Q8TER0 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SNED1Q8TER0 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.11□□□□□ -1.43
SNED1Q8TER0 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SNED1Q8TER0 AC092681.1-201ENST00000297369 291 ntBASIC6.11□□□□□ -1.43
SNED1Q8TER0 OR4K15-201ENST00000305051 1216 ntBASIC6.11□□□□□ -1.43
SNED1Q8TER0 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SNED1Q8TER0 AL021331.1-201ENST00000402817 582 ntBASIC6.11□□□□□ -1.43
SNED1Q8TER0 AL136116.2-201ENST00000404020 785 ntBASIC6.11□□□□□ -1.43
SNED1Q8TER0 RNU4-25P-201ENST00000410569 230 ntBASIC6.11□□□□□ -1.43
SNED1Q8TER0 AC009480.2-201ENST00000422916 432 ntBASIC6.11□□□□□ -1.43
SNED1Q8TER0 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.11□□□□□ -1.43
SNED1Q8TER0 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC6.11□□□□□ -1.43
SNED1Q8TER0 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.11□□□□□ -1.43
SNED1Q8TER0 RPS17P2-201ENST00000461663 408 ntBASIC6.11□□□□□ -1.43
SNED1Q8TER0 RN7SL41P-201ENST00000476144 297 ntBASIC6.11□□□□□ -1.43
SNED1Q8TER0 AC005412.2-201ENST00000492004 341 ntBASIC6.11□□□□□ -1.43
SNED1Q8TER0 AC090058.1-201ENST00000498788 435 ntBASIC6.11□□□□□ -1.43
SNED1Q8TER0 AC098976.1-201ENST00000513014 541 ntBASIC6.11□□□□□ -1.43
SNED1Q8TER0 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.11□□□□□ -1.43
SNED1Q8TER0 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.11□□□□□ -1.43
SNED1Q8TER0 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SNED1Q8TER0 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
SNED1Q8TER0 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC6.11□□□□□ -1.43
SNED1Q8TER0 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.11□□□□□ -1.43
SNED1Q8TER0 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.11□□□□□ -1.43
SNED1Q8TER0 AC010857.1-201ENST00000606398 594 ntBASIC6.11□□□□□ -1.43
SNED1Q8TER0 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.11□□□□□ -1.43
SNED1Q8TER0 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SNED1Q8TER0 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SNED1Q8TER0 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SNED1Q8TER0 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
SNED1Q8TER0 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.11□□□□□ -1.43
SNED1Q8TER0 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms