Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NUP35Q8NFH5 CD24P2-201ENST00000565486 219 ntBASIC3.81□□□□□ -1.8
NUP35Q8NFH5 MIR744-201ENST00000578242 98 ntBASIC3.81□□□□□ -1.8
NUP35Q8NFH5 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
NUP35Q8NFH5 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC3.81□□□□□ -1.8
NUP35Q8NFH5 AC124916.2-201ENST00000604416 224 ntBASIC3.81□□□□□ -1.8
NUP35Q8NFH5 uc_338.18-201ENST00000615451 175 ntBASIC3.81□□□□□ -1.8
NUP35Q8NFH5 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC3.81□□□□□ -1.8
NUP35Q8NFH5 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC3.81□□□□□ -1.8
NUP35Q8NFH5 AP001052.1-201ENST00000626421 99 ntBASIC3.81□□□□□ -1.8
NUP35Q8NFH5 AC087565.3-203ENST00000641018 837 ntBASIC3.81□□□□□ -1.8
NUP35Q8NFH5 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
NUP35Q8NFH5 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NUP35Q8NFH5 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
NUP35Q8NFH5 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NUP35Q8NFH5 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NUP35Q8NFH5 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC3.81□□□□□ -1.8
NUP35Q8NFH5 KARSP1-201ENST00000451871 1752 ntBASIC3.81□□□□□ -1.8
NUP35Q8NFH5 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
NUP35Q8NFH5 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NUP35Q8NFH5 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
NUP35Q8NFH5 CDY3P-201ENST00000454543 1618 ntBASIC3.81□□□□□ -1.8
NUP35Q8NFH5 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 HSPA8P17-201ENST00000427029 1382 ntBASIC3.8□□□□□ -1.8
NUP35Q8NFH5 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 RNA5SP232-201ENST00000364144 119 ntBASIC3.8□□□□□ -1.8
NUP35Q8NFH5 RNU6-1263P-201ENST00000384601 106 ntBASIC3.8□□□□□ -1.8
NUP35Q8NFH5 OR8V1P-201ENST00000395193 873 ntBASIC3.8□□□□□ -1.8
NUP35Q8NFH5 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 LSM5-203ENST00000409782 649 ntTSL 5 BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 CYCSP10-201ENST00000417973 294 ntBASIC3.8□□□□□ -1.8
NUP35Q8NFH5 FABP7P1-201ENST00000424004 391 ntBASIC3.8□□□□□ -1.8
NUP35Q8NFH5 BX323845.3-201ENST00000428215 527 ntBASIC3.8□□□□□ -1.8
NUP35Q8NFH5 PNKDP1-201ENST00000435914 430 ntBASIC3.8□□□□□ -1.8
NUP35Q8NFH5 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 GAPDHP25-201ENST00000447061 1001 ntBASIC3.8□□□□□ -1.8
NUP35Q8NFH5 RPEP1-201ENST00000504507 658 ntBASIC3.8□□□□□ -1.8
NUP35Q8NFH5 AC113430.1-201ENST00000506872 718 ntBASIC3.8□□□□□ -1.8
NUP35Q8NFH5 AC021146.3-201ENST00000511911 260 ntBASIC3.8□□□□□ -1.8
NUP35Q8NFH5 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 HSD3BP3-201ENST00000514706 994 ntBASIC3.8□□□□□ -1.8
NUP35Q8NFH5 RNA5SP228-201ENST00000516232 133 ntBASIC3.8□□□□□ -1.8
NUP35Q8NFH5 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 AP000648.1-201ENST00000529682 397 ntBASIC3.8□□□□□ -1.8
NUP35Q8NFH5 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 YWHABP2-201ENST00000540201 713 ntBASIC3.8□□□□□ -1.8
NUP35Q8NFH5 DUX4L52-201ENST00000549363 777 ntBASIC3.8□□□□□ -1.8
NUP35Q8NFH5 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 AL031601.1-201ENST00000605702 394 ntBASIC3.8□□□□□ -1.8
NUP35Q8NFH5 AC023813.4-201ENST00000607580 580 ntBASIC3.8□□□□□ -1.8
NUP35Q8NFH5 AL118522.2-201ENST00000616045 615 ntBASIC3.8□□□□□ -1.8
NUP35Q8NFH5 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 OR14L1P-202ENST00000641545 3009 ntBASIC3.8□□□□□ -1.8
NUP35Q8NFH5 GHR-202ENST00000357703 4316 ntTSL 5 BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 AC112255.1-201ENST00000624070 2493 ntBASIC3.8□□□□□ -1.8
NUP35Q8NFH5 AC068446.1-201ENST00000556425 1549 ntBASIC3.8□□□□□ -1.8
NUP35Q8NFH5 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NUP35Q8NFH5 AC104966.1-201ENST00000467010 1464 ntBASIC3.79□□□□□ -1.8
NUP35Q8NFH5 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NUP35Q8NFH5 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.79□□□□□ -1.8
NUP35Q8NFH5 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NUP35Q8NFH5 OR51C1P-202ENST00000641159 1444 ntBASIC3.79□□□□□ -1.8
NUP35Q8NFH5 MIPEPP2-201ENST00000422560 1819 ntBASIC3.79□□□□□ -1.8
NUP35Q8NFH5 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
NUP35Q8NFH5 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.79□□□□□ -1.8
NUP35Q8NFH5 MTCO1P22-201ENST00000604619 1360 ntBASIC3.79□□□□□ -1.8
NUP35Q8NFH5 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NUP35Q8NFH5 AC108751.5-201ENST00000492880 1336 ntBASIC3.79□□□□□ -1.8
NUP35Q8NFH5 EEF1A1P42-201ENST00000613436 1331 ntBASIC3.79□□□□□ -1.8
NUP35Q8NFH5 CASC19-204ENST00000641001 2055 ntBASIC3.79□□□□□ -1.8
NUP35Q8NFH5 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC3.79□□□□□ -1.8
NUP35Q8NFH5 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
NUP35Q8NFH5 DDX18P3-201ENST00000404856 2007 ntBASIC3.79□□□□□ -1.8
NUP35Q8NFH5 OR52B1P-201ENST00000316506 909 ntBASIC3.79□□□□□ -1.8
NUP35Q8NFH5 TMSB4XP2-201ENST00000335179 210 ntBASIC3.79□□□□□ -1.8
NUP35Q8NFH5 RNU1-150P-201ENST00000362491 162 ntBASIC3.79□□□□□ -1.8
NUP35Q8NFH5 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC3.79□□□□□ -1.8
NUP35Q8NFH5 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC3.79□□□□□ -1.8
NUP35Q8NFH5 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC3.79□□□□□ -1.8
NUP35Q8NFH5 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC3.79□□□□□ -1.8
NUP35Q8NFH5 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.79□□□□□ -1.8
NUP35Q8NFH5 EIF4HP2-201ENST00000424380 563 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 334.4 ms