Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL669831.5-218ENST00000591702 1873 ntBASIC7.71□□□□□ -1.18
VPS8Q8N3P4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
VPS8Q8N3P4 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC7.71□□□□□ -1.18
VPS8Q8N3P4 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC7.71□□□□□ -1.18
VPS8Q8N3P4 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
VPS8Q8N3P4 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC7.7□□□□□ -1.18
VPS8Q8N3P4 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC7.7□□□□□ -1.18
VPS8Q8N3P4 AL356981.1-201ENST00000454879 684 ntBASIC7.7□□□□□ -1.18
VPS8Q8N3P4 AC245028.2-201ENST00000458673 253 ntBASIC7.7□□□□□ -1.18
VPS8Q8N3P4 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC7.7□□□□□ -1.18
VPS8Q8N3P4 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC7.7□□□□□ -1.18
VPS8Q8N3P4 RNA5SP230-201ENST00000517039 122 ntBASIC7.7□□□□□ -1.18
VPS8Q8N3P4 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC7.7□□□□□ -1.18
VPS8Q8N3P4 RN7SL690P-201ENST00000582087 240 ntBASIC7.7□□□□□ -1.18
VPS8Q8N3P4 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC7.7□□□□□ -1.18
VPS8Q8N3P4 AC239803.2-201ENST00000610161 430 ntBASIC7.7□□□□□ -1.18
VPS8Q8N3P4 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
VPS8Q8N3P4 SDAD1P1-202ENST00000524156 2051 ntBASIC7.7□□□□□ -1.18
VPS8Q8N3P4 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
VPS8Q8N3P4 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
VPS8Q8N3P4 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
VPS8Q8N3P4 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
VPS8Q8N3P4 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
VPS8Q8N3P4 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC7.7□□□□□ -1.18
VPS8Q8N3P4 AC114755.2-201ENST00000413520 361 ntBASIC7.69□□□□□ -1.18
VPS8Q8N3P4 RPL12P43-201ENST00000420608 499 ntBASIC7.69□□□□□ -1.18
VPS8Q8N3P4 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
VPS8Q8N3P4 AC073648.4-201ENST00000442655 781 ntBASIC7.69□□□□□ -1.18
VPS8Q8N3P4 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC7.69□□□□□ -1.18
VPS8Q8N3P4 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC7.69□□□□□ -1.18
VPS8Q8N3P4 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC7.69□□□□□ -1.18
VPS8Q8N3P4 AL513533.1-201ENST00000453728 415 ntBASIC7.69□□□□□ -1.18
VPS8Q8N3P4 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC7.69□□□□□ -1.18
VPS8Q8N3P4 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC7.69□□□□□ -1.18
VPS8Q8N3P4 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC7.69□□□□□ -1.18
VPS8Q8N3P4 AC091042.1-201ENST00000579213 173 ntBASIC7.69□□□□□ -1.18
VPS8Q8N3P4 AL022394.1-201ENST00000606979 292 ntBASIC7.69□□□□□ -1.18
VPS8Q8N3P4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
VPS8Q8N3P4 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC7.69□□□□□ -1.18
VPS8Q8N3P4 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC7.69□□□□□ -1.18
VPS8Q8N3P4 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
VPS8Q8N3P4 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
VPS8Q8N3P4 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC7.69□□□□□ -1.18
VPS8Q8N3P4 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
VPS8Q8N3P4 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
VPS8Q8N3P4 GAPDHP15-201ENST00000398586 975 ntBASIC7.69□□□□□ -1.18
VPS8Q8N3P4 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC7.69□□□□□ -1.18
VPS8Q8N3P4 BX510359.2-201ENST00000417920 305 ntBASIC7.69□□□□□ -1.18
VPS8Q8N3P4 QRSL1P2-201ENST00000418582 964 ntBASIC7.69□□□□□ -1.18
VPS8Q8N3P4 AL049745.1-201ENST00000433953 286 ntBASIC7.69□□□□□ -1.18
VPS8Q8N3P4 CYCSP24-201ENST00000445119 316 ntBASIC7.69□□□□□ -1.18
VPS8Q8N3P4 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC7.69□□□□□ -1.18
VPS8Q8N3P4 RPS23P1-201ENST00000491662 432 ntBASIC7.69□□□□□ -1.18
VPS8Q8N3P4 AC073073.1-201ENST00000493920 463 ntBASIC7.69□□□□□ -1.18
VPS8Q8N3P4 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC7.69□□□□□ -1.18
VPS8Q8N3P4 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC7.69□□□□□ -1.18
VPS8Q8N3P4 CDH12P4-201ENST00000517835 295 ntBASIC7.69□□□□□ -1.18
VPS8Q8N3P4 CDH12P3-201ENST00000517935 295 ntBASIC7.69□□□□□ -1.18
VPS8Q8N3P4 CDH12P1-201ENST00000518435 295 ntBASIC7.69□□□□□ -1.18
VPS8Q8N3P4 AC137768.1-201ENST00000549998 553 ntBASIC7.69□□□□□ -1.18
VPS8Q8N3P4 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC7.69□□□□□ -1.18
VPS8Q8N3P4 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC7.69□□□□□ -1.18
VPS8Q8N3P4 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
VPS8Q8N3P4 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
VPS8Q8N3P4 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
VPS8Q8N3P4 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.68□□□□□ -1.18
VPS8Q8N3P4 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC7.68□□□□□ -1.18
VPS8Q8N3P4 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
VPS8Q8N3P4 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
VPS8Q8N3P4 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
VPS8Q8N3P4 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
VPS8Q8N3P4 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
VPS8Q8N3P4 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
VPS8Q8N3P4 RN7SKP216-201ENST00000411050 312 ntBASIC7.68□□□□□ -1.18
VPS8Q8N3P4 AC007738.1-201ENST00000413892 348 ntBASIC7.68□□□□□ -1.18
VPS8Q8N3P4 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC7.68□□□□□ -1.18
VPS8Q8N3P4 FABP7P2-201ENST00000429946 379 ntBASIC7.68□□□□□ -1.18
VPS8Q8N3P4 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC7.68□□□□□ -1.18
VPS8Q8N3P4 H2AFZP6-201ENST00000444403 394 ntBASIC7.68□□□□□ -1.18
VPS8Q8N3P4 AC063949.1-201ENST00000552900 865 ntBASIC7.68□□□□□ -1.18
VPS8Q8N3P4 AL110118.1-201ENST00000553543 400 ntBASIC7.68□□□□□ -1.18
VPS8Q8N3P4 AL049830.4-201ENST00000555149 351 ntBASIC7.68□□□□□ -1.18
VPS8Q8N3P4 AC090286.3-201ENST00000573133 187 ntBASIC7.68□□□□□ -1.18
VPS8Q8N3P4 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC7.68□□□□□ -1.18
VPS8Q8N3P4 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC7.68□□□□□ -1.18
VPS8Q8N3P4 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC7.68□□□□□ -1.18
VPS8Q8N3P4 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC7.68□□□□□ -1.18
VPS8Q8N3P4 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
VPS8Q8N3P4 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
VPS8Q8N3P4 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
VPS8Q8N3P4 TANK-205ENST00000405852 2155 ntTSL 5 BASIC7.67□□□□□ -1.18
VPS8Q8N3P4 AC011755.1-201ENST00000623763 2049 ntBASIC7.67□□□□□ -1.18
VPS8Q8N3P4 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
VPS8Q8N3P4 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
VPS8Q8N3P4 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
VPS8Q8N3P4 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC7.67□□□□□ -1.18
VPS8Q8N3P4 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
VPS8Q8N3P4 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
VPS8Q8N3P4 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
VPS8Q8N3P4 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms