Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 OR52B5P-202ENST00000641118 1110 ntBASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 CASC19-221ENST00000641309 1382 ntBASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 VDAC2P1-201ENST00000399358 958 ntBASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 AC233289.1-201ENST00000403700 508 ntBASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 AL035079.1-201ENST00000405210 287 ntBASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 AC079355.1-201ENST00000421770 223 ntBASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 NIFKP7-201ENST00000503365 834 ntBASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 RNU6-964P-201ENST00000516524 69 ntBASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 AC105036.1-201ENST00000566222 271 ntBASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 AC095055.1-201ENST00000603472 1113 ntBASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 AC108359.1-201ENST00000616451 1211 ntBASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 AP002505.2-201ENST00000623585 696 ntBASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC65Q8IXS2 AC097461.1-201ENST00000568928 2821 ntBASIC5.71□□□□□ -1.49
CCDC65Q8IXS2 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CCDC65Q8IXS2 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
CCDC65Q8IXS2 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CCDC65Q8IXS2 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 SNORA17.1-201ENST00000362945 126 ntBASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 DUTP5-201ENST00000406790 469 ntBASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 CYCSP24-201ENST00000445119 316 ntBASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 AC114982.2-201ENST00000461396 358 ntBASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 AC091180.1-201ENST00000462104 372 ntBASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 AC009127.1-201ENST00000467090 155 ntBASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 UBA52P7-201ENST00000486088 380 ntBASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 MIR3176-201ENST00000582210 90 ntBASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 AC027228.2-201ENST00000567141 2154 ntBASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC65Q8IXS2 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 PANDAR-201ENST00000629595 1506 ntBASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms