Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 NEAT1-202ENST00000501122 22743 ntBASIC5□□□□□ -1.61
CCDC71Q8IV32 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CCDC71Q8IV32 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC71Q8IV32 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5□□□□□ -1.61
CCDC71Q8IV32 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5□□□□□ -1.61
CCDC71Q8IV32 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCDC71Q8IV32 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCDC71Q8IV32 SNORA48.4-201ENST00000391089 134 ntBASIC5□□□□□ -1.61
CCDC71Q8IV32 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5□□□□□ -1.61
CCDC71Q8IV32 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5□□□□□ -1.61
CCDC71Q8IV32 AC006455.6-201ENST00000426192 893 ntBASIC5□□□□□ -1.61
CCDC71Q8IV32 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCDC71Q8IV32 RPS27P18-201ENST00000431701 247 ntBASIC5□□□□□ -1.61
CCDC71Q8IV32 CNOT7P2-201ENST00000441051 832 ntBASIC5□□□□□ -1.61
CCDC71Q8IV32 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5□□□□□ -1.61
CCDC71Q8IV32 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCDC71Q8IV32 RPL7P45-201ENST00000455851 743 ntBASIC5□□□□□ -1.61
CCDC71Q8IV32 RN7SL826P-201ENST00000479724 288 ntBASIC5□□□□□ -1.61
CCDC71Q8IV32 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5□□□□□ -1.61
CCDC71Q8IV32 AC023424.1-201ENST00000496058 459 ntBASIC5□□□□□ -1.61
CCDC71Q8IV32 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5□□□□□ -1.61
CCDC71Q8IV32 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CCDC71Q8IV32 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5□□□□□ -1.61
CCDC71Q8IV32 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5□□□□□ -1.61
CCDC71Q8IV32 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5□□□□□ -1.61
CCDC71Q8IV32 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5□□□□□ -1.61
CCDC71Q8IV32 OR8G3P-201ENST00000533406 921 ntBASIC5□□□□□ -1.61
CCDC71Q8IV32 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5□□□□□ -1.61
CCDC71Q8IV32 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5□□□□□ -1.61
CCDC71Q8IV32 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5□□□□□ -1.61
CCDC71Q8IV32 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC71Q8IV32 AC127024.5-201ENST00000580085 462 ntBASIC5□□□□□ -1.61
CCDC71Q8IV32 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5□□□□□ -1.61
CCDC71Q8IV32 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5□□□□□ -1.61
CCDC71Q8IV32 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5□□□□□ -1.61
CCDC71Q8IV32 AL139407.1-201ENST00000613826 1175 ntBASIC5□□□□□ -1.61
CCDC71Q8IV32 RPSAP73-201ENST00000614820 330 ntBASIC5□□□□□ -1.61
CCDC71Q8IV32 MIR7155-201ENST00000615925 56 ntBASIC5□□□□□ -1.61
CCDC71Q8IV32 AL391597.1-201ENST00000618707 694 ntBASIC5□□□□□ -1.61
CCDC71Q8IV32 uc_338.7-201ENST00000621834 124 ntBASIC5□□□□□ -1.61
CCDC71Q8IV32 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5□□□□□ -1.61
CCDC71Q8IV32 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5□□□□□ -1.61
CCDC71Q8IV32 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
CCDC71Q8IV32 SAMMSON-209ENST00000641222 1100 ntBASIC5□□□□□ -1.61
CCDC71Q8IV32 AC073869.8-201ENST00000641806 335 ntBASIC5□□□□□ -1.61
CCDC71Q8IV32 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CCDC71Q8IV32 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC71Q8IV32 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC71Q8IV32 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC71Q8IV32 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC71Q8IV32 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5□□□□□ -1.61
CCDC71Q8IV32 AL513548.1-201ENST00000562904 1724 ntBASIC5□□□□□ -1.61
CCDC71Q8IV32 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC71Q8IV32 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 AL731532.2-201ENST00000623542 1953 ntBASIC4.99□□□□□ -1.61
CCDC71Q8IV32 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 AL009179.1-201ENST00000406085 265 ntBASIC4.99□□□□□ -1.61
CCDC71Q8IV32 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 HMGN1P8-201ENST00000463578 288 ntBASIC4.99□□□□□ -1.61
CCDC71Q8IV32 AC135999.1-201ENST00000478962 479 ntBASIC4.99□□□□□ -1.61
CCDC71Q8IV32 AC079841.1-201ENST00000481228 950 ntBASIC4.99□□□□□ -1.61
CCDC71Q8IV32 AC091544.1-201ENST00000484702 348 ntBASIC4.99□□□□□ -1.61
CCDC71Q8IV32 AL049874.2-201ENST00000492636 288 ntBASIC4.99□□□□□ -1.61
CCDC71Q8IV32 RN7SL808P-201ENST00000496066 299 ntBASIC4.99□□□□□ -1.61
CCDC71Q8IV32 AC072052.1-201ENST00000496556 306 ntBASIC4.99□□□□□ -1.61
CCDC71Q8IV32 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 PGAM1P13-201ENST00000507497 754 ntBASIC4.99□□□□□ -1.61
CCDC71Q8IV32 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 KCTD9P6-201ENST00000522306 950 ntBASIC4.99□□□□□ -1.61
CCDC71Q8IV32 AC100784.1-201ENST00000522790 310 ntBASIC4.99□□□□□ -1.61
CCDC71Q8IV32 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.99□□□□□ -1.61
CCDC71Q8IV32 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 AL049779.2-201ENST00000553847 315 ntBASIC4.99□□□□□ -1.61
CCDC71Q8IV32 SETP1-201ENST00000556014 845 ntBASIC4.99□□□□□ -1.61
CCDC71Q8IV32 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 AC010547.7-201ENST00000570323 333 ntBASIC4.99□□□□□ -1.61
CCDC71Q8IV32 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 AC016911.1-201ENST00000613297 452 ntBASIC4.99□□□□□ -1.61
CCDC71Q8IV32 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 CASC19-222ENST00000641321 1173 ntBASIC4.99□□□□□ -1.61
CCDC71Q8IV32 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms