Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5□□□□□ -1.61
C11orf88Q6PI97 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5□□□□□ -1.61
C11orf88Q6PI97 AL163152.1-201ENST00000642001 374 ntBASIC5□□□□□ -1.61
C11orf88Q6PI97 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5□□□□□ -1.61
C11orf88Q6PI97 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
C11orf88Q6PI97 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5□□□□□ -1.61
C11orf88Q6PI97 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5□□□□□ -1.61
C11orf88Q6PI97 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
C11orf88Q6PI97 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
C11orf88Q6PI97 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AC092681.1-201ENST00000297369 291 ntBASIC4.99□□□□□ -1.61
C11orf88Q6PI97 RNA5SP375-201ENST00000362975 119 ntBASIC4.99□□□□□ -1.61
C11orf88Q6PI97 RNA5SP346-201ENST00000363541 121 ntBASIC4.99□□□□□ -1.61
C11orf88Q6PI97 SNORD51.1-201ENST00000365405 77 ntBASIC4.99□□□□□ -1.61
C11orf88Q6PI97 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 RN7SKP121-201ENST00000410842 305 ntBASIC4.99□□□□□ -1.61
C11orf88Q6PI97 RN7SKP108-201ENST00000411367 328 ntBASIC4.99□□□□□ -1.61
C11orf88Q6PI97 MTCO3P4-201ENST00000419236 787 ntBASIC4.99□□□□□ -1.61
C11orf88Q6PI97 SEC63P1-201ENST00000425785 1258 ntBASIC4.99□□□□□ -1.61
C11orf88Q6PI97 RPS7P14-201ENST00000426405 583 ntBASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AL136231.1-201ENST00000429407 730 ntBASIC4.99□□□□□ -1.61
C11orf88Q6PI97 PNKDP1-201ENST00000435914 430 ntBASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AC025459.1-201ENST00000504072 156 ntBASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AC138832.1-201ENST00000522871 556 ntBASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AC036111.2-201ENST00000533247 901 ntBASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AP001858.2-201ENST00000536213 601 ntBASIC4.99□□□□□ -1.61
C11orf88Q6PI97 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 HMGB3P26-201ENST00000560051 582 ntBASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 MIR4701-201ENST00000583094 63 ntBASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AC119403.2-201ENST00000590960 598 ntBASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 COX6CP7-201ENST00000597056 208 ntBASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AC067773.1-201ENST00000603284 1094 ntBASIC4.99□□□□□ -1.61
C11orf88Q6PI97 OR4H6P-202ENST00000603819 340 ntBASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AC015982.1-201ENST00000608113 465 ntBASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.99□□□□□ -1.61
C11orf88Q6PI97 BNIP3P41-202ENST00000616656 861 ntBASIC4.99□□□□□ -1.61
C11orf88Q6PI97 MIR6133-201ENST00000617057 108 ntBASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AL445670.1-201ENST00000618889 801 ntBASIC4.99□□□□□ -1.61
C11orf88Q6PI97 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 AC130304.1-201ENST00000622942 2385 ntBASIC4.99□□□□□ -1.61
C11orf88Q6PI97 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
C11orf88Q6PI97 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.98□□□□□ -1.61
C11orf88Q6PI97 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
C11orf88Q6PI97 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.98□□□□□ -1.61
C11orf88Q6PI97 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
C11orf88Q6PI97 AC007996.1-201ENST00000620414 2821 ntBASIC4.98□□□□□ -1.61
C11orf88Q6PI97 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.98□□□□□ -1.61
C11orf88Q6PI97 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
C11orf88Q6PI97 AC000123.3-201ENST00000624029 4975 ntBASIC4.98□□□□□ -1.61
C11orf88Q6PI97 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
C11orf88Q6PI97 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
C11orf88Q6PI97 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
C11orf88Q6PI97 RNU105B-201ENST00000364478 208 ntBASIC4.98□□□□□ -1.61
C11orf88Q6PI97 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
C11orf88Q6PI97 HMGN1P20-201ENST00000411849 300 ntBASIC4.98□□□□□ -1.61
C11orf88Q6PI97 MTND4P11-201ENST00000417020 1058 ntBASIC4.98□□□□□ -1.61
C11orf88Q6PI97 FAR1P1-201ENST00000427163 934 ntBASIC4.98□□□□□ -1.61
C11orf88Q6PI97 HMGN2P27-201ENST00000427352 270 ntBASIC4.98□□□□□ -1.61
C11orf88Q6PI97 AC115283.1-201ENST00000427353 400 ntBASIC4.98□□□□□ -1.61
C11orf88Q6PI97 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.98□□□□□ -1.61
C11orf88Q6PI97 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.98□□□□□ -1.61
C11orf88Q6PI97 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.98□□□□□ -1.61
C11orf88Q6PI97 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.98□□□□□ -1.61
C11orf88Q6PI97 MTCO3P43-201ENST00000440974 771 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms